RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SPP1P10451 314 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 GLB1P16278 677 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 SLC6A1P30531 599 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 LTBRP36941 435 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 GAS1P54826 345 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 NANOS3P60323 173 aaKnown RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 DCDP81605 110 aaKnown RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 MRPS10P82664 201 aaKnown RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.51□□□□□ -0.89
CALD1-203ENST00000393118 C5orf46Q6UWT4 87 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 COX15Q7KZN9 410 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 MDGA2Q7Z553 956 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 ATG4DQ86TL0 474 aaPredicted RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 PNLDC1Q8NA58 520 aaKnown RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 DUSP18Q8NEJ0 188 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 BPIFCQ8NFQ6 507 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 OR52H1Q8NGJ2 320 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 OR51S1Q8NGJ8 323 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 HLA-CQ95604 372 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 FGGYQ96C11 551 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 ZNF251Q9BRH9 671 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 RGCCQ9H4X1 137 aa9.51□□□□□ -0.89
CALD1-203ENST00000393118 MRM2Q9UI43 246 aaKnown RBP9.51□□□□□ -0.89
CALD1-203ENST00000393118 PRAF2O60831 178 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MPC2O95563 127 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 CSF1P09603 554 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 NQO2P16083 231 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MMP15P51511 669 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 CXADRP78310 365 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 EBPQ15125 230 aaKnown RBP9.5□□□□□ -0.89
CALD1-203ENST00000393118 PDZD11Q5EBL8 140 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ST7LQ8TDW4 575 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MICU1Q9BPX6 476 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 FSCN3Q9NQT6 498 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ST6GALNAC2Q9UJ37 374 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 HELZP42694 1942 aaKnown RBP9.5□□□□□ -0.89
CALD1-203ENST00000393118 PLXNA2O75051 1894 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MEGF11A6BM72 1044 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MT-ATP6P00846 226 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ZNF28P17035 718 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 BCKDHBP21953 392 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ACHEP22303 614 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 SSTP61278 116 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 RNF4P78317 190 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 SGCBQ16585 318 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MESTQ5EB52 335 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 UNQ6126/PRO20091Q6UXV3 157 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 NR2C2APQ86WQ0 139 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ZNF679Q8IYX0 411 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 BVESQ8NE79 360 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 OR51A4Q8NGJ6 313 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 OR5D18Q8NGL1 313 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 OR1N1Q8NGS0 311 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 HAVCR2Q8TDQ0 301 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ABHD6Q9BV23 337 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 PRRG4Q9BZD6 226 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 ANKRD10Q9NXR5 420 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 HIF3AQ9Y2N7 669 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 SIT1Q9Y3P8 196 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 EEF1E1-BLOC1S5C9J1V9 151 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 TSTD3H0UI37 97 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 PRH1P02810 166 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 UBBP0CG47 229 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 UBCP0CG48 685 aaKnown RBP9.5□□□□□ -0.89
CALD1-203ENST00000393118 OTX2P32243 289 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 CSF2RBP32927 897 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 SKP2Q13309 424 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 WDR38Q5JTN6 314 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 NKAPLQ5M9Q1 402 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 TMEM244Q5VVB8 128 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 FIP1L1Q6UN15 594 aaKnown RBP9.5□□□□□ -0.89
CALD1-203ENST00000393118 ZNRF4Q8WWF5 429 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MVB12AQ96EY5 273 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 PGLYRP3Q96LB9 341 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 OR5V1Q9UGF6 321 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 KLHDC2Q9Y2U9 406 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 MTCH2Q9Y6C9 303 aa9.5□□□□□ -0.89
CALD1-203ENST00000393118 TP53BP1Q12888 1972 aaPredicted RBP9.49□□□□□ -0.89
CALD1-203ENST00000393118 OGG1O15527 345 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 RNF224P0DH78 156 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 CTLA4P16410 223 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 CCNOP22674 350 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 DLSTP36957 453 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 SELENOPP49908 381 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 SMAD4Q13485 552 aaKnown RBP9.49□□□□□ -0.89
CALD1-203ENST00000393118 SLC17A1Q14916 467 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 SLC22A6Q4U2R8 563 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 H1FNTQ75WM6 255 aaPredicted RBP9.49□□□□□ -0.89
CALD1-203ENST00000393118 OR52B4Q8NGK2 314 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 OR10R2Q8NGX6 335 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 OR52A1Q9UKL2 312 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 ICAM5Q9UMF0 924 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 LOC107986453A0A1B0GWG9 222 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 MBTPS2O43462 519 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 F10P00742 488 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 NR2C1P13056 603 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 EFNB1P98172 346 aa9.49□□□□□ -0.89
CALD1-203ENST00000393118 FABP9Q0Z7S8 132 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms