RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 ANKRD33BA6NCL7 494 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 ANKRD61A6NGH8 418 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 PHF1O43189 567 aaPredicted RBP11.44□□□□□ -0.58
CLTC-202ENST00000393043 RPS27P42677 84 aaKnown RBP11.44□□□□□ -0.58
CLTC-202ENST00000393043 TGM4P49221 684 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 C11orf91Q3C1V1 193 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 TAAR8Q969N4 342 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 BARHL1Q9BZE3 327 aa11.44□□□□□ -0.58
CLTC-202ENST00000393043 HSPB6O14558 160 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 CXCL13O43927 109 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 RAB6AP20340 208 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 OR10K1Q8NGX5 313 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 OR1L3Q8NH93 324 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 CPNE4Q96A23 557 aaPredicted RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 ERVMER34-1Q9H9K5 563 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 FOXJ3Q9UPW0 622 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 LINC01387J3KSC0 135 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 TGM6O95932 706 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 GUSBP08236 651 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 PRSS41Q7RTY9 318 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 ALG1L2C9J202 215 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 LUMP51884 338 aaPredicted RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 ZNF117Q03924 483 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 ZNF266Q14584 549 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 FAM109BQ6ICB4 259 aaPredicted RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 SMIM4Q8WVI0 70 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 SEH1LQ96EE3 360 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 RBM38Q9H0Z9 239 aaKnown RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 EXOSC3Q9NQT5 275 aaKnown RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 PCDHB10Q9UN67 800 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 HBE1P02100 147 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 NOXO1Q8NFA2 376 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 OR4D6Q8NGJ1 314 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 EMG1Q92979 244 aaKnown RBP11.43□□□□□ -0.58
CLTC-202ENST00000393043 ZG16BQ96DA0 208 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 SH3BGRL2Q9UJC5 107 aa11.43□□□□□ -0.58
CLTC-202ENST00000393043 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 POM121CA8CG34 1229 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SNRPGP15A8MWD9 76 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 PLPP2O43688 288 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 IGHV3-9P01782 118 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 CD79BP40259 229 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 MMP15P51511 669 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 TFAP2EQ6VUC0 442 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TMEM200AQ86VY9 491 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 WDFY2Q96P53 400 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 C20orf141Q9NUB4 165 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 MBD1Q9UIS9 605 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 PCOLCE2Q9UKZ9 415 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 PMS2P1A4D2B8 440 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 OR6C6A6NF89 314 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TMEM235A6NFC5 223 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 IFNA10P01566 189 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 KIR2DL1P43626 348 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 PAN3Q58A45 887 aaKnown RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 FYTTD1Q96QD9 318 aaKnown RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 TAAR9Q96RI9 348 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 UBL7Q96S82 380 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 CYSLTR2Q9NS75 346 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 POLDIP2Q9Y2S7 368 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 BOLA1Q9Y3E2 137 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TNS1Q9HBL0 1735 aaKnown RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 A0A1B0GUH1 482 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 DEGS1O15121 323 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TOX3O15405 576 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 RGS11O94810 467 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TPOP07202 933 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 GABRB1P18505 474 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 TAS2R30P59541 319 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 CLN3Q13286 438 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 VHLLQ6RSH7 139 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SLC38A9Q8NBW4 561 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SLAMF9Q96A28 289 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SARAFQ96BY9 339 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 ARGFXA6NJG6 315 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SMLR1H3BR10 107 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SLC17A2O00624 439 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 LIMS3P0CW19 117 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 LIMS4P0CW20 117 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 ALDH3B1P43353 468 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 ZNF136P52737 540 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 HMGN3Q15651 99 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 RNLSQ5VYX0 342 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SFTPA1Q8IWL2 248 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 OR51F2Q8NH61 342 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.42□□□□□ -0.58
CLTC-202ENST00000393043 TMEM9BQ9NQ34 198 aa11.42□□□□□ -0.58
CLTC-202ENST00000393043 SCN4AP35499 1836 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 A8MXE2 369 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 SPINT2O43291 252 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 XRCC3O43542 346 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 TNFSF14O43557 240 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 NRASP01111 189 aa11.41□□□□□ -0.58
CLTC-202ENST00000393043 GSTP1P09211 210 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms