RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 NME2P22392 152 aa22.27■■□□□ 1.16
SHOX2-201ENST00000389589 GLT8D1Q68CQ7 371 aa22.27■■□□□ 1.16
SHOX2-201ENST00000389589 ASPHD2Q6ICH7 369 aa22.27■■□□□ 1.16
SHOX2-201ENST00000389589 SYNPRQ8TBG9 265 aa22.27■■□□□ 1.16
SHOX2-201ENST00000389589 RBM24Q9BX46 236 aaKnown RBP22.27■■□□□ 1.16
SHOX2-201ENST00000389589 ARGFXA6NJG6 315 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 KLRC4-KLRK1H3BQV0 150 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 BOLA2-SMG1P6H3BVE0 249 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 RER1O15258 196 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 KIR2DL3P43628 341 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 DUSP18Q8NEJ0 188 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 GJC3Q8NFK1 279 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 ROBO4Q8WZ75 1007 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 NABP1Q96AH0 204 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 ZFP3Q96NJ6 502 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 TAS2R4Q9NYW5 299 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 NPAP1Q9NZP6 1156 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 SLC17A2O00624 439 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 SULT1B1O43704 296 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 CYTIPO60759 359 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 TPPPO94811 219 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 NBL1P41271 181 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 PLGLB1Q02325 96 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 LUZP2Q86TE4 346 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 HAVCR1Q96D42 359 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 FAM86C1Q9NVL1 165 aa22.26■■□□□ 1.15
SHOX2-201ENST00000389589 LANCL1O43813 399 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 CD37P11049 281 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 CD46P15529 392 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 MRPS34P82930 218 aaKnown RBP22.25■■□□□ 1.15
SHOX2-201ENST00000389589 RAB11BQ15907 218 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 ATP1A1-AS1Q5TC04 95 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 UBE2J2Q8N2K1 259 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 C15orf40Q8WUR7 153 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 YIPF5Q969M3 257 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 ITPKCQ96DU7 683 aa22.25■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF275Q9NSD4 429 aaPredicted RBP22.25■■□□□ 1.15
SHOX2-201ENST00000389589 DDX28Q9NUL7 540 aaKnown RBP22.25■■□□□ 1.15
SHOX2-201ENST00000389589 FAM240BA0A1B0GVZ2 78 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 GLSO94925 669 aaPredicted RBP22.24■■□□□ 1.15
SHOX2-201ENST00000389589 CTSSP25774 331 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 RFC3P40938 356 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 ENDOGQ14249 297 aaKnown RBP22.24■■□□□ 1.15
SHOX2-201ENST00000389589 HYAL4Q2M3T9 481 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 AGAP6Q5VW22 663 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 PLET1Q6UQ28 207 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 AAED1Q7RTV5 226 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 MMP28Q9H239 520 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 SYT7O43581 403 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 DOK2O60496 412 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 ADRB1P08588 477 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 LHX2P50458 406 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 GALNTL5Q7Z4T8 443 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 TMEM251Q8N6I4 163 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 RNF121Q9H920 327 aa22.24■■□□□ 1.15
SHOX2-201ENST00000389589 FAM166BA8MTA8 275 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 MNDAP41218 407 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 MAGEA5P43359 124 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 MEOX1P50221 254 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 PRKXP51817 358 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 HIST1H3AP68431 136 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 HIST2H3PS2Q5TEC6 136 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 FAM166AQ6J272 317 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 HIST2H3AQ71DI3 136 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 SMIM4Q8WVI0 70 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 HPS1Q92902 700 aa22.23■■□□□ 1.15
SHOX2-201ENST00000389589 A0A1B0GVI7 797 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 A6NL46 340 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 ITGA5P08648 1049 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 CELA3AP09093 270 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 FAM157BP0CG42 384 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 CX3CR1P49238 355 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 DGCR2P98153 550 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 FAM27BQ5VT28 67 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 NKAIN3Q8N8D7 197 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF775Q96BV0 537 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-201ENST00000389589 IRF2BPLQ9H1B7 796 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 TFECO14948 347 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF121P58317 390 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-201ENST00000389589 MRPS10P82664 201 aaKnown RBP22.22■■□□□ 1.15
SHOX2-201ENST00000389589 TMEM69Q5SWH9 247 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 AKAP14Q86UN6 197 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 SERPINA12Q8IW75 414 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 GPR137CQ8N3F9 429 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 TOMM5Q8N4H5 51 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 MEIOBQ8N635 442 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 PLPP7Q8NBV4 271 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 CPT1CQ8TCG5 803 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 HAS2Q92819 552 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF845Q96IR2 970 aaPredicted RBP22.22■■□□□ 1.15
SHOX2-201ENST00000389589 CACNG2Q9Y698 323 aa22.22■■□□□ 1.15
SHOX2-201ENST00000389589 CLDN18P56856 261 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 GPR176Q14439 515 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 SLC36A2Q495M3 483 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 LINGO2Q7L985 606 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 IZUMO1Q8IYV9 350 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 ZNF283Q8N7M2 679 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 TMEM45BQ96B21 275 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 FAM3DQ96BQ1 224 aa22.21■■□□□ 1.15
SHOX2-201ENST00000389589 FOXRED1Q96CU9 486 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms