RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 LHX8Q68G74 356 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 SSX9Q7RTT3 188 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 SFTPA1Q8IWL2 248 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF775Q96BV0 537 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 FBRSQ9HAH7 460 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLC2A4RGQ9NR83 387 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 GDE1Q9NZC3 331 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 PIAS3Q9Y6X2 628 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 LTBP1Q14766 1721 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 A0A1W2PPV9 198 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRSS37A4D1T9 235 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 A8MVM7 634 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CNOT4O95628 575 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CHRM2P08172 466 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 SFTA3P0C7M3 94 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 NME1P15531 152 aaKnown RBP11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CD96P40200 585 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 GVQW1Q8N7I0 195 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR51A4Q8NGJ6 313 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 MARVELD3Q96A59 401 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 FRRS1LQ9P0K9 344 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 CYB5R1Q9UHQ9 305 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 B9D1Q9UPM9 204 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
TRAPPC9-201ENST00000389328 MFSD2BA6NFX1 497 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 CA3P07451 260 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 HOXD4P09016 255 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 TAGLN2P37802 199 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 EFNB2P52799 333 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF74Q16587 644 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 DEFB133Q30KQ1 61 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 AGBL4Q5VU57 503 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 MCEMP1Q8IX19 187 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 TMEM217Q8N7C4 229 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PIGTQ969N2 578 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 B3GALT5Q9Y2C3 310 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 TRPM6Q9BX84 2022 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PLSCR5A0PG75 271 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 KCNAB3O43448 404 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 FABP1P07148 127 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 HNF4GQ14541 408 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZIC1Q15915 447 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 RGS7BPQ6MZT1 257 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 FAM219AQ8IW50 185 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 STPG2Q8N412 459 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 OTOSQ8NHW6 89 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 RLN3Q8WXF3 142 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PGLYRP3Q96LB9 341 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR8B4Q96RC9 309 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 NELFAQ9H3P2 528 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 LHX9Q9NQ69 397 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 DKKL1Q9UK85 242 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 IGHG1P01857 330 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 KCNJ3P48549 501 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ADPRHP54922 357 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 NANOS3P60323 173 aaKnown RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 EMC4Q5J8M3 183 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 HIST2H3PS2Q5TEC6 136 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ZNF660Q6AZW8 331 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 LRRC18Q8N456 261 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR5M8Q8NGP6 311 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 BAHD1Q8TBE0 780 aaPredicted RBP11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 SPPL3Q8TCT6 385 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 WNT2BQ93097 391 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 MOGAT1Q96PD6 335 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 MED29Q9NX70 200 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 NUDT19A8MXV4 375 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 SULT2B1O00204 365 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 NKX2-2O95096 273 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 IFNA4P05014 189 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PPP2CBP62714 309 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PPP2CAP67775 309 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 PJVKQ0ZLH3 352 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 NPEPL1Q8NDH3 523 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ASB13Q8WXK3 278 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 SSX3Q99909 188 aa11.88□□□□□ -0.51
TRAPPC9-201ENST00000389328 ALOX12BO75342 701 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 MTCP1P56278 107 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRTGQ2VWP7 1150 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 OVCH2Q7RTZ1 564 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NR2C2APQ86WQ0 139 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 ETFBKMTQ8IXQ9 262 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 EXD3Q8N9H8 876 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SLC46A1Q96NT5 459 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SPIN2AQ99865 258 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SPIN2BQ9BPZ2 258 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 PRSS27Q9BQR3 290 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 NUDT9Q9BW91 350 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 CXorf51AA0A1B0GTR3 108 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR5K3A6NET4 321 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 PPP1R2P9O14990 202 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 JTBO76095 146 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 OR2C1O95371 312 aa11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 RPS18P62269 152 aaKnown RBP11.87□□□□□ -0.51
TRAPPC9-201ENST00000389328 SRSF5Q13243 272 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms