RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 GGNQ86UU5 652 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ZNF436Q9C0F3 470 aaPredicted RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 LDAHQ9H6V9 325 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 MED29Q9NX70 200 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 ZNF224Q9NZL3 707 aa11.06□□□□□ -0.64
CIITA-202ENST00000381835 PCDHGA9Q9Y5G4 932 aaKnown RBP11.06□□□□□ -0.64
CIITA-202ENST00000381835 NPIPA5E9PKD4 350 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 MKRN2OSH3BPM6 223 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 K7EM74 188 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 XKRYO14609 159 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 TOXO94900 526 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 TXNDC12O95881 172 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 CAPZA2P47755 286 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 EIF1AXP47813 144 aaKnown RBP11.05□□□□□ -0.64
CIITA-202ENST00000381835 P2RY4P51582 365 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 ACTC1P68032 377 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 ACTA1P68133 377 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 HSF1Q00613 529 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 SRYQ05066 204 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 AANATQ16613 207 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 CDONQ4KMG0 1287 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 BAIAP2L2Q6UXY1 529 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 OR2T35Q8NGX2 323 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 ZNF671Q8TAW3 534 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 HAVCR2Q8TDQ0 301 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 EXTL1Q92935 676 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 TSSK2Q96PF2 358 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 MFRPQ9BY79 579 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 SRXN1Q9BYN0 137 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 C20orf85Q9H1P6 137 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 TSPAN10Q9H1Z9 355 aaPredicted RBP11.05□□□□□ -0.64
CIITA-202ENST00000381835 EXO5Q9H790 373 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 B3GAT1Q9P2W7 334 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 NPIPA1Q9UND3 350 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 LIPGQ9Y5X9 500 aa11.05□□□□□ -0.64
CIITA-202ENST00000381835 RPS10-NUDT3A0A1W2PQS6 291 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 AQP7P3A6NL99 342 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 C1QTNF9BB2RNN3 333 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 LINC01387J3KSC0 135 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 ARL6IP5O75915 188 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 HPXP02790 462 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 C1QTNF9P0C862 333 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 CLDN15P56746 228 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 CARD18P57730 90 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 DYRK1AQ13627 763 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 KLF9Q13886 244 aaPredicted RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 TP53I3Q53FA7 332 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 IGFL3Q6UXB1 125 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SLC35D2Q76EJ3 337 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SSX6Q7RTT6 188 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 HDDC2Q7Z4H3 204 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 UEVLDQ8IX04 471 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 IZUMO1Q8IYV9 350 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 RADILQ96JH8 1075 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 DDOQ99489 341 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 METTL17Q9H7H0 456 aaPredicted RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 AUNIPQ9H7T9 357 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SRA1Q9HD15 236 aaKnown RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 COQ3Q9NZJ6 369 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 MRPL15Q9P015 296 aaKnown RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 ST6GALNAC2Q9UJ37 374 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 AK6Q9Y3D8 172 aaKnown RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 BSNQ9UPA5 3926 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 A0A1W2PNV4 684 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 FAM171A2A8MVW0 826 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 GSTZ1O43708 216 aaPredicted RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 CXCL13O43927 109 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 PEX14O75381 377 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SLC2A5P22732 501 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 GDNFP39905 211 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 HCCSP53701 268 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 TMPRSS3P57727 454 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 RAC3P60763 192 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 ZP1P60852 638 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 H3F3AP84243 136 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 ZNF169Q14929 603 aaPredicted RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 SFRP4Q6FHJ7 346 aaPredicted RBP11.04□□□□□ -0.64
CIITA-202ENST00000381835 FTMTQ8N4E7 242 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 ADPRHL1Q8NDY3 354 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 OR10D3Q8NH80 312 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 OR2V1Q8NHB1 315 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 ZNF519Q8TB69 540 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 RBP7Q96R05 134 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 EMC6Q9BV81 110 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SYT4Q9H2B2 425 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 SPATA2Q9UM82 520 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 MAB21L2Q9Y586 359 aa11.04□□□□□ -0.64
CIITA-202ENST00000381835 M0R233 179 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 CTDSPLO15194 276 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 MAGEB4O15481 346 aaPredicted RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 RENP00797 406 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 IGHMP01871 453 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 ZNF43P17038 809 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 SPI1P17947 270 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 SELENOPP49908 381 aa11.03□□□□□ -0.64
CIITA-202ENST00000381835 GDI2P50395 445 aaKnown RBP11.03□□□□□ -0.64
CIITA-202ENST00000381835 LHX2P50458 406 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms