RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 ZNF420Q8TAQ5 688 aaPredicted RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 GCDHQ92947 438 aaPredicted RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 HAVCR1Q96D42 359 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SAMD8Q96LT4 415 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 ERMAPQ96PL5 475 aaPredicted RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 DUX5Q96PT3 197 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 FUZQ9BT04 418 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SUCNR1Q9BXA5 334 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 SRA1Q9HD15 236 aaKnown RBP11.92□□□□□ -0.5
SHOX-202ENST00000381575 SPAG4Q9NPE6 437 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 PPIAL4AQ9Y536 164 aa11.92□□□□□ -0.5
SHOX-202ENST00000381575 IGLV1-36A0A0B4J1U3 117 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 TRIM77I1YAP6 450 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 FOXH1O75593 365 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 CYB5R3P00387 301 aaPredicted RBP11.91□□□□□ -0.5
SHOX-202ENST00000381575 TNFRSF1AP19438 455 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 MMP16P51512 607 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 RPS6KA3P51812 740 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 KRT72Q14CN4 511 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 DPY19L2P2Q6ZN68 376 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 USP43Q70EL4 1123 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 KLHL36Q8N4N3 616 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 ZDHHC22Q8N966 263 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 OR4K13Q8NH42 304 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 ZFAND2BQ8WV99 257 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 PTP4A1Q93096 173 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 CMTM5Q96DZ9 223 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 DHRS1Q96LJ7 313 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 NMNAT3Q96T66 252 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 WACQ9BTA9 647 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 PLA2G12AQ9BZM1 189 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 PATZ1Q9HBE1 687 aaKnown RBP11.91□□□□□ -0.5
SHOX-202ENST00000381575 IL19Q9UHD0 177 aa11.91□□□□□ -0.5
SHOX-202ENST00000381575 SAMD4AQ9UPU9 718 aaKnown RBP11.91□□□□□ -0.5
SHOX-202ENST00000381575 TMEM178BH3BS89 294 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 NDUFAB1O14561 156 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 GADD45GO95257 159 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 TXNDC12O95881 172 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 RAC2P15153 192 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 HIST1H1CP16403 213 aaKnown RBP11.9□□□□□ -0.5
SHOX-202ENST00000381575 KCNMB1Q16558 191 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 FAM201AQ5SY85 155 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 CFAP77Q6ZQR2 320 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 LRRC28Q86X40 367 aaPredicted RBP11.9□□□□□ -0.5
SHOX-202ENST00000381575 OR6V1Q8N148 313 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 SPICQ8N5J4 248 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 SIGLECL1Q8N7X8 197 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 SDR9C7Q8NEX9 313 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 FAM216AQ8WUB2 273 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 DVL3Q92997 716 aaPredicted RBP11.9□□□□□ -0.5
SHOX-202ENST00000381575 MEGF10Q96KG7 1140 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 OR52D1Q9H346 318 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 GCM1Q9NP62 436 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 MED4Q9NPJ6 270 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 RPRD1BQ9NQG5 326 aaKnown RBP11.9□□□□□ -0.5
SHOX-202ENST00000381575 B9D1Q9UPM9 204 aa11.9□□□□□ -0.5
SHOX-202ENST00000381575 TRRAPQ9Y4A5 3859 aa11.9□□□□□ -0.51
SHOX-202ENST00000381575 IGHV3OR16-10A0A075B7F0 116 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 CEACAM18A8MTB9 384 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 F5H0A9 414 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 F5H5P2 479 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 MLNRO43193 412 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 OR10H3O60404 316 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 GMNNO75496 209 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 SEMG1P04279 462 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 GATA3P23771 443 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 HOXA4Q00056 320 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 RSPO1Q2MKA7 263 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 ARMCX4Q5H9R4 360 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 KLF17Q5JT82 389 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 FBXW12Q6X9E4 464 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 MOGAT3Q86VF5 341 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 BCL6BQ8N143 479 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 GJC3Q8NFK1 279 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 OR8G5Q8NG78 346 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 PYURFQ96I23 114 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 IFT27Q9BW83 186 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 HDHD2Q9H0R4 259 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 KRCC1Q9NPI7 259 aaPredicted RBP11.89□□□□□ -0.51
SHOX-202ENST00000381575 ZNF69Q9UC07 566 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 MEGF8Q7Z7M0 2845 aa11.89□□□□□ -0.51
SHOX-202ENST00000381575 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 F5H5K5 113 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 ARPC2O15144 300 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 SURF4O15260 269 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 RENP00797 406 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 HLA-DPB1P04440 258 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 ZNF12P17014 697 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 TUBG1P23258 451 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 ANOS1P23352 680 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 CRABP1P29762 137 aa11.88□□□□□ -0.51
SHOX-202ENST00000381575 PRDX6P30041 224 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms