RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RPS23P62266 143 aaKnown RBP14.58□□□□□ -0.07
COL2A1-202ENST00000380518 CDC20Q12834 499 aa14.58□□□□□ -0.07
COL2A1-202ENST00000380518 OR52N5Q8NH56 324 aa14.58□□□□□ -0.07
COL2A1-202ENST00000380518 ARSGQ96EG1 525 aa14.58□□□□□ -0.07
COL2A1-202ENST00000380518 MRGPRX4Q96LA9 322 aa14.58□□□□□ -0.07
COL2A1-202ENST00000380518 EGLN1Q9GZT9 426 aa14.58□□□□□ -0.07
COL2A1-202ENST00000380518 MN1Q10571 1320 aaPredicted RBP14.58□□□□□ -0.08
COL2A1-202ENST00000380518 NXPH3O95157 252 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 CLN3Q13286 438 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 C2orf76Q3KRA6 126 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 TIGD3Q6B0B8 471 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 IFI44Q8TCB0 444 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 OR2A14Q96R47 310 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 SHARPINQ9H0F6 387 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 PSMB6P28072 239 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 RPS27P42677 84 aaKnown RBP14.58□□□□□ -0.08
COL2A1-202ENST00000380518 LGALS4P56470 323 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 SNTB1Q13884 538 aaKnown RBP14.58□□□□□ -0.08
COL2A1-202ENST00000380518 OR8G1Q15617 311 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF628Q5EBL2 1059 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 STAC2Q6ZMT1 411 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 KMT5CQ86Y97 462 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF687Q8N1G0 1237 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 ATF6BQ99941 703 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 MENTQ9BUN1 341 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 MED29Q9NX70 200 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 IMPA2O14732 288 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 TMEM127O75204 238 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 OR10A3P58181 314 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF75AQ96N20 296 aa14.58□□□□□ -0.08
COL2A1-202ENST00000380518 KLF13Q9Y2Y9 288 aaPredicted RBP14.58□□□□□ -0.08
COL2A1-202ENST00000380518 CACNA1CQ13936 2221 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 LGALS8O00214 317 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 PPP1R2P9O14990 202 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ICMTO60725 284 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ALX3O95076 343 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 EIF4EP06730 217 aaKnown RBP14.57□□□□□ -0.08
COL2A1-202ENST00000380518 MAGEB1P43366 347 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 AGBL4Q5VU57 503 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 C8orf44Q96CB5 159 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ADAM19Q9H013 955 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 FRG2CA6NGY1 282 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 RAD52P43351 418 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 GSK3AP49840 483 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 B4GALNT1Q00973 533 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF85Q03923 595 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 SHBQ15464 509 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 TMEM196Q5HYL7 178 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 CMTM2Q8TAZ6 248 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 SLC22A13Q9Y226 551 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ALS2Q96Q42 1657 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 PEX11BO96011 259 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 APOA2P02652 100 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 SOX18P35713 384 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 PRAMEF5Q5TYX0 476 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 PRAMEF6Q5VXH4 476 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 FOXB2Q5VYV0 432 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
COL2A1-202ENST00000380518 LHFPL2Q6ZUX7 228 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 BAGE3Q86Y29 109 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 BAGE2Q86Y30 109 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 OR5AS1Q8N127 324 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 MITD1Q8WV92 249 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 SLC17A4Q9Y2C5 497 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 PLCH1Q4KWH8 1693 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 SNRPGP15A8MWD9 76 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 ARR3P36575 388 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 CCR2P41597 374 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 RNF4P78317 190 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 KIRREL2Q6UWL6 708 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 USP51Q70EK9 711 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 CALHM3Q86XJ0 350 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 CCDC71Q8IV32 467 aaPredicted RBP14.57□□□□□ -0.08
COL2A1-202ENST00000380518 OR2G2Q8NGZ5 317 aa14.57□□□□□ -0.08
COL2A1-202ENST00000380518 GNPNAT1Q96EK6 184 aaPredicted RBP14.57□□□□□ -0.08
COL2A1-202ENST00000380518 A0A0A6YYJ9 748 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 XRCC2O43543 280 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 NRASP01111 189 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 PRR35P0CG20 571 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 CBR1P16152 277 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 CLDN20P56880 219 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF468Q5VIY5 522 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 NT5CQ8TCD5 201 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 NUDCD2Q8WVJ2 157 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 MED30Q96HR3 178 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 CRLF2Q9HC73 371 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 WSB2Q9NYS7 404 aaPredicted RBP14.56□□□□□ -0.08
COL2A1-202ENST00000380518 A0A0A6YYD5 115 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 OR13C7P0DN81 318 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 GLI4P10075 376 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 SRFP11831 508 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 GLULP15104 373 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 GLB1P16278 677 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 TOR2AQ5JU69 321 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 ZNF626Q68DY1 528 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 LAIR1Q6GTX8 287 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 IL34Q6ZMJ4 242 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 SCCPDHQ8NBX0 429 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 BOD1Q96IK1 185 aa14.56□□□□□ -0.08
COL2A1-202ENST00000380518 SPACA5Q96QH8 159 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms