RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 SMPD2O60906 423 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 NGFP01138 241 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 EIF2B1Q14232 305 aaKnown RBP16.13■□□□□ 0.17
SSU72-203ENST00000378725 MEDAGQ5VYS4 303 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 TTC23Q5W5X9 447 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 UNQ6126/PRO20091Q6UXV3 157 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 ENTHD1Q8IYW4 607 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 RNF133Q8WVZ7 376 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 MRPL24Q96A35 216 aaKnown RBP16.13■□□□□ 0.17
SSU72-203ENST00000378725 SLAMF6Q96DU3 332 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 ABHD6Q9BV23 337 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 DNAJC27Q9NZQ0 273 aa16.13■□□□□ 0.17
SSU72-203ENST00000378725 B9A039 149 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 H0YJX3 145 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 ATP6V1G2O95670 118 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 ZNF250P15622 560 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 PAX1P15863 534 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 ALOX5APP20292 161 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 TUBG1P23258 451 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 OTX1P32242 354 aaPredicted RBP16.12■□□□□ 0.17
SSU72-203ENST00000378725 NAA10P41227 235 aaPredicted RBP16.12■□□□□ 0.17
SSU72-203ENST00000378725 EVX1P49640 407 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 NUDT6P53370 316 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 COLCA1Q6ZS62 124 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 DHRSXQ8N5I4 330 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 OR1J1Q8NGS3 322 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 RFKQ969G6 155 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 AMELYQ99218 206 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 DOK1Q99704 481 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 VCXQ9H320 206 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 ADGRL4Q9HBW9 690 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 TUBG2Q9NRH3 451 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 BEX4Q9NWD9 120 aaPredicted RBP16.12■□□□□ 0.17
SSU72-203ENST00000378725 GRIP1Q9Y3R0 1128 aa16.12■□□□□ 0.17
SSU72-203ENST00000378725 ITPR2Q14571 2701 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ZNF878C9JN71 531 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 H0YAE9 185 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 J3QW42 95 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ENTPD6O75354 484 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ABHD16AO95870 558 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 LCKP06239 509 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ACSM4P0C7M7 580 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 RGS6P49758 472 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 HCCSP53701 268 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ERVS71-1P61550 626 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 DEFB113Q30KQ7 82 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ZNF691Q5VV52 312 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 RGS7BPQ6MZT1 257 aaPredicted RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 RFPL4BQ6ZWI9 263 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ABHD4Q8TB40 342 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 THEM6Q8WUY1 208 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 SPTSSAQ969W0 71 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 MARS2Q96GW9 593 aaKnown RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 CNN2Q99439 309 aaKnown RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 MNTQ99583 582 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 APOL4Q9BPW4 351 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 C1QTNF5Q9BXJ0 243 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 MRPL37Q9BZE1 423 aaKnown RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 OR51B6Q9H340 312 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 PLK3Q9H4B4 646 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 CENPMQ9NSP4 180 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 ZNF701Q9NV72 531 aaPredicted RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 RRP15Q9Y3B9 282 aaKnown RBP16.11■□□□□ 0.17
SSU72-203ENST00000378725 ABCA12Q86UK0 2595 aa16.11■□□□□ 0.17
SSU72-203ENST00000378725 HEATR1Q9H583 2144 aaKnown RBP16.1■□□□□ 0.17
SSU72-203ENST00000378725 F5H5K5 113 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 LYNP07948 512 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 MRPL3P09001 348 aaKnown RBP16.1■□□□□ 0.17
SSU72-203ENST00000378725 SBK2P0C263 348 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 OPRL1P41146 370 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 SLC15A1P46059 708 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 TPTEP56180 551 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 PPP1CBP62140 327 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 GRB2P62993 217 aaKnown RBP16.1■□□□□ 0.17
SSU72-203ENST00000378725 POU4F2Q12837 409 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 NAA40Q86UY6 237 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 CYGBQ8WWM9 190 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 COG8Q96MW5 612 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 KCNJ15Q99712 375 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 ADI1Q9BV57 179 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 AASSQ9UDR5 926 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 LAMP5Q9UJQ1 280 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.1■□□□□ 0.17
SSU72-203ENST00000378725 KLHDC2Q9Y2U9 406 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 STARD10Q9Y365 291 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 TMEM14AQ9Y6G1 99 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 PDZD2O15018 2839 aa16.1■□□□□ 0.17
SSU72-203ENST00000378725 IGLV3-9A0A075B6K5 115 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 H3BSA7 217 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 CAPGP40121 348 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 IL18R1Q13478 541 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 TAF13Q15543 124 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 ZNF718Q3SXZ3 478 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 MBNL2Q5VZF2 373 aaKnown RBP16.09■□□□□ 0.17
SSU72-203ENST00000378725 DRAM2Q6UX65 266 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 LRP11Q86VZ4 500 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 OR51G2Q8NGK0 314 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 SYNPRQ8TBG9 265 aa16.09■□□□□ 0.17
SSU72-203ENST00000378725 SLC25A40Q8TBP6 338 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms