RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PXDC1Q5TGL8 231 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 OTPQ5XKR4 325 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 FAM186AA6NE01 2351 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 TUBAL3A6NHL2 446 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 CBX7O95931 251 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 S100A8P05109 93 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ANXA7P20073 488 aaKnown RBP13.64□□□□□ -0.23
NPHP4-201ENST00000378156 PDLIM3Q53GG5 364 aaPredicted RBP13.64□□□□□ -0.23
NPHP4-201ENST00000378156 VHLLQ6RSH7 139 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 KIRREL2Q6UWL6 708 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 OR2A5Q96R48 311 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 PLSCR3Q9NRY6 295 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 DOCK3Q8IZD9 2030 aa13.64□□□□□ -0.23
NPHP4-201ENST00000378156 ZFC3H1O60293 1989 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 IGHV3-9P01782 118 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 RAF1P04049 648 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 APEHP13798 732 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 CPT2P23786 658 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 NDUFA6P56556 154 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 C21orf58P58505 322 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 BDH1Q02338 343 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 OR10R2Q8NGX6 335 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 DCLRE1CQ96SD1 692 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 ATF6BQ99941 703 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 SIRT3Q9NTG7 399 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 CGGBP1Q9UFW8 167 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 FBXL4Q9UKA2 621 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 TRPM6Q9BX84 2022 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 PTPRFP10586 1907 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 GZMMP51124 257 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 RBM39Q14498 530 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 PAN3Q58A45 887 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 HEPHL1Q6MZM0 1159 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 TTC9Q92623 222 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 DDOQ99489 341 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 ZNF629Q9UEG4 869 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 PURGQ9UJV8 347 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 IGHV1OR15-9A0A0B4J2B8 117 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 KITLGP21583 273 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 CDK5R1Q15078 307 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 BRICD5Q6PL45 260 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 Q6ZTK2 550 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 OR4N2Q8NGD1 307 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 LIPHQ8WWY8 451 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 B3GALT5Q9Y2C3 310 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 APC2O95996 2303 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 C17orf112F2Z3M2 114 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 OR2F2O95006 317 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 QDPRP09417 244 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 GNB3P16520 340 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 PDZK1IP1Q13113 114 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 IKZF1Q13422 519 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 OR2F1Q13607 317 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 KIAA0141Q14154 515 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 CPNE4Q96A23 557 aaPredicted RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 SMIM19Q96E16 107 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 WWTR1Q9GZV5 400 aa13.63□□□□□ -0.23
NPHP4-201ENST00000378156 PATZ1Q9HBE1 687 aaKnown RBP13.63□□□□□ -0.23
NPHP4-201ENST00000378156 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 K7EQS6 105 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 RRP8O43159 456 aaKnown RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 LIMS3P0CW19 117 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 LIMS4P0CW20 117 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 MRPS34P82930 218 aaKnown RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 SLC25A35Q3KQZ1 300 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 WDR5BQ86VZ2 330 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 SKA3Q8IX90 412 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 OR10Z1Q8NGY1 313 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 TXN2Q99757 166 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 EDEM2Q9BV94 578 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 KLF13Q9Y2Y9 288 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 HRH3Q9Y5N1 445 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 TRIOBPQ9H2D6 2365 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 A0A0A6YYJ9 748 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 HYAL3O43820 417 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 MT-ND4LP03901 98 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 NAGAP17050 411 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 MITD1Q8WV92 249 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 SLC25A32Q9H2D1 315 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 C12orf49Q9H741 205 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 ASH2LQ9UBL3 628 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 CEBPZOSA8MTT3 80 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 TIMM8AO60220 97 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 NFYBP25208 207 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 GABRA2P47869 451 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 OR2L13Q8N349 312 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 DAZAP1Q96EP5 407 aaKnown RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 MRGPRX4Q96LA9 322 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 C20orf141Q9NUB4 165 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 CTSFQ9UBX1 484 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 LOC100289279A0A1B0GTE1 492 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 FFAR1O14842 300 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 ZNF780AO75290 641 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 TNFSF15O95150 251 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 SYS1Q8N2H4 156 aa13.62□□□□□ -0.23
NPHP4-201ENST00000378156 SP7Q8TDD2 431 aaPredicted RBP13.62□□□□□ -0.23
NPHP4-201ENST00000378156 PCDHGA5Q9Y5G8 931 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms