RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 PWWP2BQ6NUJ5 590 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PSMF1Q92530 271 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CTHRC1Q96CG8 243 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 COL25A1Q9BXS0 654 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FAM96BQ9Y3D0 163 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 MVDP53602 400 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DHRS11Q6UWP2 260 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 BTNL8Q6UX41 500 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 MRGPRGQ86SM5 289 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 GCDHQ92947 438 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CGGBP1Q9UFW8 167 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 USP22Q9UPT9 525 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 BLVRBP30043 206 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 A0A1B0GX78 115 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 AQP7P3A6NL99 342 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR51F2Q8NH61 342 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 WFIKKN1Q96NZ8 548 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 BANF2Q9H503 90 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CES1P1Q9UKY3 287 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TRBV6-7A0A0A0MS04 114 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FAM166BA8MTA8 275 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PCCBP05166 539 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TJP1Q07157 1748 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SERPINF1P36955 418 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CRMP1Q14194 572 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PARS2Q7L3T8 475 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DCUN1D4Q92564 292 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SLC22A13Q9Y226 551 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FITM1A5D6W6 292 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 P04436 131 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ST6GAL1P15907 406 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR8D2Q9GZM6 311 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CHST11Q9NPF2 352 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CLEC4EQ9ULY5 219 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZFPL1O95159 310 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 AQP2P41181 271 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ABLIM2Q6H8Q1 611 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 Q6ZSR6 202 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SLC38A9Q8NBW4 561 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZNRF4Q8WWF5 429 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 BORCS7Q96B45 105 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 GINS3Q9BRX5 216 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 V9GYH0 126 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR5AR1Q8NGP9 310 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 M1APQ8TC57 530 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZBP1Q9H171 429 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 WSB1Q9Y6I7 421 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 UTS2O95399 124 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR8U8P0C7N1 319 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SLC6A11P48066 632 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PIGTQ969N2 578 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 INSM2Q96T92 566 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 RPL12P30050 165 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PMPCAQ10713 525 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF681Q96N22 645 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DIRC2Q96SL1 478 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PKD1L3Q7Z443 1732 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 WNT11O96014 354 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DCNP07585 359 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DSCR4P56555 118 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FAM3BP58499 235 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DPY19L4Q7Z388 723 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FJX1Q86VR8 437 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 PACRGQ96M98 296 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 AQP10Q96PS8 301 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 C17orf105B2RV13 164 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TRDCB7Z8K6 153 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 RAB27BO00194 218 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 HAND1O96004 215 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 IGLV3-19P01714 112 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 SLC19A1P41440 591 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 RAC3P60763 192 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FAM58AQ8N1B3 248 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR10P1Q8NGE3 313 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 VN1R3Q9BXE9 311 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 MAGT1Q9H0U3 335 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CARHSP1Q9Y2V2 147 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CD80P33681 288 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR51B6Q9H340 312 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 KLRC4-KLRK1H3BQV0 150 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR4Q2P0C623 313 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 TMEM249Q2WGJ8 235 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 DERL3Q96Q80 235 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 AZGP1P25311 298 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FGF13Q92913 245 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 OR1N1Q8NGS0 311 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 AK6Q9Y3D8 172 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ARGFXA6NJG6 315 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 LRRC30A6NM36 301 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 RPP14O95059 124 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 UBE2KP61086 200 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ETFBKMTQ8IXQ9 262 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 FAM110BQ8TC76 370 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 ZDHHC1Q8WTX9 485 aa4.47□□□□□ -1.69
PCDH9-201ENST00000377861 LIN7CQ9NUP9 197 aaKnown RBP4.47□□□□□ -1.69
PCDH9-201ENST00000377861 CD74P04233 296 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 CCL5P13501 91 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF17P17021 662 aa4.46□□□□□ -1.69
PCDH9-201ENST00000377861 BTF3P20290 206 aaKnown RBP4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms