RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 LRG1P02750 347 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 CSTBP04080 98 aaKnown RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 HTR2CP28335 458 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 DDTP30046 118 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 GABRA3P34903 492 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 SPCS3P61009 180 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 RAB32Q13637 225 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TMEM268Q5VZI3 342 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 CYB5R2Q6BCY4 276 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 AWAT2Q6E213 333 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TRAPPC6BQ86SZ2 158 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 LYPD6BQ8NI32 183 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 OR10C1Q96KK4 312 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 DCBLD2Q96PD2 775 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TAS2R4Q9NYW5 299 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 C19orf53Q9UNZ5 99 aaPredicted RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 SNRNP200O75643 2136 aaKnown RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TBC1D3IA0A087WXS9 549 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 LDLRAD4O15165 306 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 PNPP00491 289 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 IFNA17P01571 189 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 ZNF888P0CJ79 500 aaPredicted RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 S100A2P29034 98 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 MAP3K8P41279 467 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TSFMP43897 325 aaKnown RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 RPS23P62266 143 aaKnown RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TDGQ13569 410 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 SLC9A3R2Q15599 337 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TMEM225Q6GV28 225 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 CA5BP1Q8WTZ4 195 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 CYYR1Q96J86 154 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 TMEM68Q96MH6 324 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 NEU1Q99519 415 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 CMKLR1Q99788 373 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 LMAN1LQ9HAT1 526 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 HDGFL3Q9Y3E1 203 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 DNAH14Q0VDD8 3507 aa14.06□□□□□ -0.16
CSNK1A1-202ENST00000377843 DCDC2BA2VCK2 349 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 BTBD17A6NE02 478 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 ALOX5APP20292 161 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 PEBP1P30086 187 aaKnown RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 PDZD11Q5EBL8 140 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 OR2A2Q6IF42 318 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 FAHD2BQ6P2I3 314 aaPredicted RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 SPRED2Q7Z698 418 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 AQP3Q92482 292 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 ARRDC3Q96B67 414 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 FAHD2AQ96GK7 314 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 SSX3Q99909 188 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 POLE3Q9NRF9 147 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 ZNF107Q9UII5 783 aaPredicted RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 POMT1Q9Y6A1 747 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 MPZP25189 248 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 MAS1LP35410 378 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 RPS10P46783 165 aaKnown RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 HMGN3Q15651 99 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 FCRL6Q6DN72 434 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 CLEC9AQ6UXN8 241 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 PNLDC1Q8NA58 520 aaKnown RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 UBAC2Q8NBM4 344 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 RCBTB1Q8NDN9 531 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 MR1Q95460 341 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 TMEM230Q96A57 120 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 IGSF21Q96ID5 467 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 NUDT9Q9BW91 350 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 MKKSQ9NPJ1 570 aaPredicted RBP14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 MMP24Q9Y5R2 645 aa14.05□□□□□ -0.16
CSNK1A1-202ENST00000377843 A0A087X0M5 115 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 A0A1B0GX30 115 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 GRXCR1A8MXD5 290 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 SLC35G4P0C7Q5 338 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 SNCAP37840 140 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 RPS4XP62701 263 aaKnown RBP14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 ZNF260Q3ZCT1 412 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 MTSS1LQ765P7 747 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 TMEFF1Q8IYR6 380 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 CSNK1A1LQ8N752 337 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 KDF1Q8NAX2 398 aaPredicted RBP14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 OR8D1Q8WZ84 308 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 RELTQ969Z4 430 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 DUSP22Q9NRW4 184 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 GTF2A1LQ9UNN4 478 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 SCN2AQ99250 2005 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 A0A087WV62 115 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 A0A1B0GWJ7 208 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 UMAD1C9J7I0 102 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 NME2P1O60361 137 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 F13BP05160 661 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 CT62P0C5K7 136 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 CPMP14384 443 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 CEBPBP17676 345 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 PI3P19957 117 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 SPEM2Q0P670 501 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 RUNX2Q13950 521 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 RSU1Q15404 277 aa14.04□□□□□ -0.16
CSNK1A1-202ENST00000377843 MIDNQ504T8 468 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms