RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 CST1P01037 141 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 TFP02787 698 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 ADH4P08319 380 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 FAM157CP0CG43 387 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 IGFBP5P24593 272 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 IL2RGP31785 369 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 CRYBB2P43320 205 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 HIST1H3AP68431 136 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 PPP1R8Q12972 351 aaKnown RBP14.32□□□□□ -0.12
HMGN4-201ENST00000377575 HFEQ30201 348 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 TMEM255AQ5JRV8 349 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 HIST2H3PS2Q5TEC6 136 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 HIST2H3AQ71DI3 136 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 ADGRG5Q8IZF4 528 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 PROKR2Q8NFJ6 384 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 OR10G2Q8NGC3 310 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 OR5L1Q8NGL2 311 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 OR2AJ1Q8NGZ0 328 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 OR2T4Q8NH00 348 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 SLC7A6Q92536 515 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 SOX7Q9BT81 388 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 CHID1Q9BWS9 393 aa14.32□□□□□ -0.12
HMGN4-201ENST00000377575 ARRDC5A6NEK1 342 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 KIAA1324LA8MWY0 1029 aaPredicted RBP14.31□□□□□ -0.12
HMGN4-201ENST00000377575 CLDN25C9JDP6 229 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 DBHP09172 617 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 ZNF823P16415 610 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 KITLGP21583 273 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 TNFSF4P23510 183 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 CDH15P55291 814 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 ECH1Q13011 328 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 PSG7Q13046 419 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 FLOT2Q14254 428 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 SLC18B1Q6NT16 456 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 CORO6Q6QEF8 472 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 LNX2Q8N448 690 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 OR2T33Q8NG76 320 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 OR8D4Q8NGM9 314 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 CLDND2Q8NHS1 167 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 APOBEC3DQ96AK3 386 aaPredicted RBP14.31□□□□□ -0.12
HMGN4-201ENST00000377575 TIMD4Q96H15 378 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 C1orf159Q96HA4 380 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 TSSK6Q9BXA6 273 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 POFUT1Q9H488 388 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 NARFLQ9H6Q4 476 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 KLHL21Q9UJP4 597 aa14.31□□□□□ -0.12
HMGN4-201ENST00000377575 PURGQ9UJV8 347 aaKnown RBP14.31□□□□□ -0.12
HMGN4-201ENST00000377575 CUBNO60494 3623 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 GNGT2O14610 69 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 SOX14O95416 240 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 IFNGP01579 166 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CD55P08174 381 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 PCMT1P22061 227 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 SLC3A1Q07837 685 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CFAP77Q6ZQR2 320 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 LINC00346Q8IVM7 164 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CYB561A3Q8NBI2 242 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 TEX47Q8TBZ9 253 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 GIPC3Q8TF64 312 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CANT1Q8WVQ1 401 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CMBLQ96DG6 245 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 PITX2Q99697 317 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 ATF6BQ99941 703 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 YY1AP1Q9H869 796 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 MSL2Q9HCI7 577 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 ARMC1Q9NVT9 282 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 CYB5R1Q9UHQ9 305 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 STARD10Q9Y365 291 aa14.3□□□□□ -0.12
HMGN4-201ENST00000377575 SVEP1Q4LDE5 3571 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 B4DSR2 109 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 DNAJC8O75937 253 aaPredicted RBP14.29□□□□□ -0.12
HMGN4-201ENST00000377575 RAC2P15153 192 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 ZNF3P17036 446 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 PYCR1P32322 319 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 GGT2P36268 569 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 TNFAIP6P98066 277 aaPredicted RBP14.29□□□□□ -0.12
HMGN4-201ENST00000377575 FAM120AOSQ5T036 256 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 CD300LDQ6UXZ3 194 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 SPATA24Q86W54 205 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 SLC37A3Q8NCC5 494 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 PTP4A1Q93096 173 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 NIPSNAP1Q9BPW8 284 aa14.29□□□□□ -0.12
HMGN4-201ENST00000377575 MRPL22Q9NWU5 206 aaKnown RBP14.29□□□□□ -0.12
HMGN4-201ENST00000377575 RIIAD1A6NNX1 92 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 E2F6O75461 281 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 DYSFO75923 2080 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 SRD5A1P18405 259 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 DVL1P1P54792 670 aaPredicted RBP14.28□□□□□ -0.12
HMGN4-201ENST00000377575 DBPQ10586 325 aaPredicted RBP14.28□□□□□ -0.12
HMGN4-201ENST00000377575 CDK5R2Q13319 367 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 AVPI1Q5T686 147 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 FBXW12Q6X9E4 464 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 PEG10Q86TG7 708 aaKnown RBP14.28□□□□□ -0.12
HMGN4-201ENST00000377575 GLCCI1Q86VQ1 547 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 OR2Z1Q8NG97 314 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 OR4Q3Q8NH05 313 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 CCL17Q92583 94 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 RAB1CQ92928 201 aa14.28□□□□□ -0.12
HMGN4-201ENST00000377575 SLC7A6OSQ96CW6 309 aaPredicted RBP14.28□□□□□ -0.12
HMGN4-201ENST00000377575 HAVCR1Q96D42 359 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms