RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 ZDHHC21Q8IVQ6 265 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 KLHDC1Q8N7A1 406 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 GPR32P1Q8NGA4 272 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 PYDC1Q8WXC3 89 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 SH3YL1Q96HL8 342 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 JSRP1Q96MG2 331 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 TSSK2Q96PF2 358 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 DUX5Q96PT3 197 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 ZNF300Q96RE9 604 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 MCHR1Q99705 422 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 ARHGDIGQ99819 225 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 FAM173AQ9BQD7 235 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 OSBPL11Q9BXB4 747 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 POLR2J2Q9GZM3 115 aaKnown RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 POLR2J3Q9H1A7 115 aaKnown RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 DSN1Q9H410 356 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 DCLRE1BQ9H816 532 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 SH2D2AQ9NP31 389 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 ARMC1Q9NVT9 282 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 FLRT3Q9NZU0 649 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 MED11Q9P086 117 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 B4GALT7Q9UBV7 327 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 TMCC3Q9ULS5 477 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 BOKQ9UMX3 212 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 KLF13Q9Y2Y9 288 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 CHCHD2Q9Y6H1 151 aaPredicted RBP4.82□□□□□ -1.64
SSX3-203ENST00000376895 ENPP4Q9Y6X5 453 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 CCDC88CQ9P219 2028 aa4.82□□□□□ -1.64
SSX3-203ENST00000376895 IGLV3-32A0A0A0MS00 114 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 TRAPPC13A5PLN9 417 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 C5orf51A6NDU8 294 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CLDN24A6NM45 220 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 NPIPA3F8WFD2 350 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 G3V3Y1 287 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 C16orf97H3BN30 126 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 hCG_2039718K7EN88 272 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 FAAHO00519 579 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CLOCKO15516 846 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 GMFGO60234 142 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 NME2P1O60361 137 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CDC40O60508 579 aaKnown RBP eCLIP4.81□□□□□ -1.64
SSX3-203ENST00000376895 TRIM3O75382 744 aaPredicted RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 E2F6O75461 281 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 TRAPPC6AO75865 159 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR5F1O95221 314 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CST1P01037 141 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ALPLP05186 524 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 IGHV4-31P0DP07 118 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 THRBP10828 461 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 PNMTP11086 282 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CXCR1P25024 350 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 FKBP2P26885 142 aaKnown RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 MAPK3P27361 379 aaPredicted RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 DPP4P27487 766 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 RRM2P31350 389 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 SFTPDP35247 375 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 IFNGR2P38484 337 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 EIF1P41567 113 aaKnown RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 SLC1A3P43003 542 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 YAP1P46937 504 aaKnown RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 GLIPR1P48060 266 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 DNASE1L1P49184 302 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 TNFSF10P50591 281 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CRYBA2P53672 197 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 B3GALT5-AS1P59052 145 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ZNF117Q03924 483 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ST3GAL3Q11203 375 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 RIPK1Q13546 671 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 GK3PQ14409 553 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 TRAM2Q15035 370 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 RCN1Q15293 331 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR1Q1Q15612 314 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CD226Q15762 336 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR5M10Q6IEU7 315 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR2T5Q6IEZ7 315 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ZNF613Q6PF04 617 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ULK3Q6PHR2 472 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 SLC22A16Q86VW1 577 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 RBM45Q8IUH3 476 aaKnown RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 SERPINA12Q8IW75 414 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CADM2Q8N3J6 435 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 MDS2Q8NDY4 140 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CATSPER1Q8NEC5 780 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR2M7Q8NG81 312 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR6T1Q8NGN1 323 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 OR2T29Q8NH02 315 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 GPR119Q8TDV5 335 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 PHF10Q8WUB8 498 aaKnown RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 DNAJA4Q8WW22 397 aaPredicted RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 ST8SIA1Q92185 356 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 SLC38A4Q969I6 547 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 CENPNQ96H22 339 aaPredicted RBP4.81□□□□□ -1.64
SSX3-203ENST00000376895 C7orf34Q96L11 122 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ZNF597Q96LX8 424 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 SIGLEC12Q96PQ1 595 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 C1QTNF4Q9BXJ3 329 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 ADNPQ9H2P0 1102 aa4.81□□□□□ -1.64
SSX3-203ENST00000376895 UBQLN3Q9H347 655 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms