RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PTP4A1Q93096 173 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 MCUR1Q96AQ8 359 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 SLC6A7Q99884 636 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 IL1RAPQ9NPH3 570 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 IL19Q9UHD0 177 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 PPP1R3CQ9UQK1 317 aa17.76■□□□□ 0.43
VSX1-201ENST00000376707 RER1O15258 196 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 RAC2P15153 192 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 FPR3P25089 353 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 RGS6P49758 472 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 SPIBQ01892 262 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 KCNMB1Q16558 191 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 CCDC92Q53HC0 331 aaPredicted RBP17.75■□□□□ 0.43
VSX1-201ENST00000376707 DNM1P34Q6PK57 102 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.75■□□□□ 0.43
VSX1-201ENST00000376707 ZNF283Q8N7M2 679 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 FAM216AQ8WUB2 273 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 ITLN1Q8WWA0 313 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 GCDHQ92947 438 aaPredicted RBP17.75■□□□□ 0.43
VSX1-201ENST00000376707 RBM4Q9BWF3 364 aaKnown RBP17.75■□□□□ 0.43
VSX1-201ENST00000376707 OPN4Q9UHM6 478 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 ATPIF1Q9UII2 106 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 NBEAL1Q6ZS30 2694 aa17.75■□□□□ 0.43
VSX1-201ENST00000376707 PPIAL4EA0A075B759 164 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PPIAL4CA0A0B4J2A2 164 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PPIAL4DF5H284 164 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 J3QW42 95 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 ARPC3O15145 178 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 FABP3P05413 133 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 DBHP09172 617 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PPIAL4FP0DN26 164 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 FPR2P25090 351 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 ZFP36P26651 326 aaKnown RBP17.74■□□□□ 0.43
VSX1-201ENST00000376707 CFPP27918 469 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 CRABP1P29762 137 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 CDKN2AP42771 156 aaKnown RBP17.74■□□□□ 0.43
VSX1-201ENST00000376707 ERFP50548 548 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 RFX4Q33E94 735 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 TMEM155Q4W5P6 130 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PGM2L1Q6PCE3 622 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 DEFB107AQ8IZN7 70 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 OR5AS1Q8N127 324 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 ATG16L2Q8NAA4 619 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 OR5L1Q8NGL2 311 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 OR2V2Q96R30 315 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PATZ1Q9HBE1 687 aaKnown RBP17.74■□□□□ 0.43
VSX1-201ENST00000376707 PTTG3PQ9NZH4 202 aa17.74■□□□□ 0.43
VSX1-201ENST00000376707 PPP1R3DO95685 299 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 RBMXP38159 391 aaKnown RBP17.73■□□□□ 0.43
VSX1-201ENST00000376707 MNAT1P51948 309 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 BTG1P62324 171 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 ZMYND11Q15326 602 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 LRRC28Q86X40 367 aaPredicted RBP17.73■□□□□ 0.43
VSX1-201ENST00000376707 GJC3Q8NFK1 279 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 FANK1Q8TC84 345 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 TSSK2Q96PF2 358 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 ERMAPQ96PL5 475 aaPredicted RBP17.73■□□□□ 0.43
VSX1-201ENST00000376707 HDHD2Q9H0R4 259 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 OR52D1Q9H346 318 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 TANC2Q9HCD6 1990 aa17.73■□□□□ 0.43
VSX1-201ENST00000376707 OR10H3O60404 316 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 GPANK1O95872 356 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 FSHBP01225 129 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 RRM2P31350 389 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 SLC6A6P31641 620 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 IFNGR2P38484 337 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 GSSP48637 474 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 HLXQ14774 488 aaPredicted RBP17.72■□□□□ 0.43
VSX1-201ENST00000376707 MEP1BQ16820 701 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 SLC27A4Q6P1M0 643 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 FBXW12Q6X9E4 464 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 JAZF1Q86VZ6 243 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 C22orf15Q8WYQ4 148 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 APOBEC3DQ96AK3 386 aaPredicted RBP17.72■□□□□ 0.43
VSX1-201ENST00000376707 COQ7Q99807 217 aa17.72■□□□□ 0.43
VSX1-201ENST00000376707 IGLV1-36A0A0B4J1U3 117 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 TMEM89A2RUT3 159 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 DCTN6O00399 190 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 SLC6A9P48067 706 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 COMPP49747 757 aaPredicted RBP17.71■□□□□ 0.43
VSX1-201ENST00000376707 HMGA2P52926 109 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 HIST1H3AP68431 136 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 ARMCX4Q5H9R4 360 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 HIST2H3PS2Q5TEC6 136 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 OR2T2Q6IF00 324 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 LEG1Q6P5S2 330 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 HIST2H3AQ71DI3 136 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 ZDHHC21Q8IVQ6 265 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 FITM2Q8N6M3 262 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 C3orf56Q8N813 242 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 DEFB108BQ8NET1 73 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 OR8G5Q8NG78 346 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 OR10AD1Q8NGE0 317 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 OR13G1Q8NGZ3 307 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 ZNF582Q96NG8 517 aaPredicted RBP17.71■□□□□ 0.43
VSX1-201ENST00000376707 SIGLEC11Q96RL6 698 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
VSX1-201ENST00000376707 GCM1Q9NP62 436 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 MMP26Q9NRE1 261 aa17.71■□□□□ 0.43
VSX1-201ENST00000376707 ACTR3BQ9P1U1 418 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms