RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 MS4A8Q9BY19 250 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 NRSN2Q9GZP1 204 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF350Q9GZX5 532 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 STEAP1Q9UHE8 339 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 SLC7A7Q9UM01 511 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CSAG2Q9Y5P2 127 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 KNTC1P50748 2209 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ADAM10O14672 748 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 F10P00742 488 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 PMP2P02689 132 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 AMY2AP04746 511 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CFIP05156 583 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 GYPBP06028 91 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 FCGR3AP08637 254 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ITGA5P08648 1049 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CD27P26842 260 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 TGM3Q08188 693 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ACTBL2Q562R1 376 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 OR6X1Q8NH79 312 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 SPACA7Q96KW9 195 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 AICDAQ9GZX7 198 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 DUSP15Q9H1R2 295 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CYTL1Q9NRR1 136 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ASCC3Q8N3C0 2202 aaKnown RBP10.95□□□□□ -0.66
C9orf3-203ENST00000375315 PRICKLE3O43900 615 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-203ENST00000375315 MLC1Q15049 377 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ANKRD16Q6P6B7 361 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 FIGLAQ6QHK4 219 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF511Q8NB15 262 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 ACBD4Q8NC06 268 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 SECTM1Q8WVN6 248 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 TCTN2Q96GX1 697 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 TGM7Q96PF1 710 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CNN2Q99439 309 aaKnown RBP10.95□□□□□ -0.66
C9orf3-203ENST00000375315 PHB2Q99623 299 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CDC6Q99741 560 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CCDC3Q9BQI4 270 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 TWSG1Q9GZX9 223 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 CALML5Q9NZT1 146 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 MRPS2Q9Y399 296 aaKnown RBP10.95□□□□□ -0.66
C9orf3-203ENST00000375315 HEBP2Q9Y5Z4 205 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 SPTBN2O15020 2390 aa10.95□□□□□ -0.66
C9orf3-203ENST00000375315 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 EEF1E1-BLOC1S5C9J1V9 151 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 C9JQL5 133 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 EIF1AYO14602 144 aaKnown RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 ZNF888P0CJ79 500 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 DAOP14920 347 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 RPS10P46783 165 aaKnown RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 EIF1AXP47813 144 aaKnown RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 SULT1A1P50225 295 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 CCR5P51681 352 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 FXYD6P3P58550 94 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 SLC26A5P58743 744 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 RHEBQ15382 184 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 UNQ6494/PRO21346Q6UXR6 183 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 HIST2H3AQ71DI3 136 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 LYG2Q86SG7 212 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 CCDC116Q8IYX3 515 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 CDK20Q8IZL9 346 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 AVL9Q8NBF6 648 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 OR1J1Q8NGS3 322 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 MOAP1Q96BY2 351 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 PCBD2Q9H0N5 130 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 BCO1Q9HAY6 547 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 SOHLH2Q9NX45 425 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 KCNE5Q9UJ90 142 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 ATG4BQ9Y4P1 393 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 C5orf51A6NDU8 294 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 TNFRSF10CO14798 259 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 P2RX6O15547 441 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 KCNAB3O43448 404 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 THY1P04216 161 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 ARG1P05089 322 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 HCKP08631 526 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 ST6GAL1P15907 406 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 FUT1P19526 365 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 GFERP55789 205 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 RAB1AP62820 205 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 REEP5Q00765 189 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 NHLH2Q02577 135 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 OR8G1Q15617 311 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 UBE3DQ7Z6J8 389 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 SLC35F2Q8IXU6 374 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 TMEM229BQ8NBD8 167 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 ZMYND19Q96E35 227 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 SUCNR1Q9BXA5 334 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 GLIPR2Q9H4G4 154 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 FAM60AQ9NP50 221 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 DOK5Q9P104 306 aa10.94□□□□□ -0.66
C9orf3-203ENST00000375315 PTPRZ1P23471 2315 aaPredicted RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 RIF1Q5UIP0 2472 aaKnown RBP10.94□□□□□ -0.66
C9orf3-203ENST00000375315 URB1O60287 2271 aaKnown RBP10.93□□□□□ -0.66
C9orf3-203ENST00000375315 FAM221BA6H8Z2 402 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 FAM157AC9JC47 383 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 WNT11O96014 354 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 CRHP06850 196 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 BSGP35613 385 aa10.93□□□□□ -0.66
C9orf3-203ENST00000375315 LPAR6P43657 344 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms