RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 HTR1FP30939 366 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 CD52P31358 61 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 RAB5BP61020 215 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 OR1Q1Q15612 314 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ZNF74Q16587 644 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 CLEC12AQ5QGZ9 265 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 GPRC6AQ5T6X5 926 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ZNF620Q6ZNG0 422 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SLCO4C1Q6ZQN7 724 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 MRPL41Q8IXM3 137 aaKnown RBP8.04□□□□□ -1.12
UBR4-201ENST00000375218 AQP11Q8NBQ7 271 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 IL17FQ96PD4 163 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 OR6C1Q96RD1 312 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 TMPRSS5Q9H3S3 457 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 KIAA1456Q9P272 454 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 FBXO4Q9UKT5 387 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 FAM96BQ9Y3D0 163 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 WDR45Q9Y484 360 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SHISA3A0PJX4 238 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 MYBPHLA2RUH7 354 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ANKUB1A6NFN9 424 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 IGLV3-25P01717 112 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 EPXP11678 715 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ZNF30P17039 623 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 NUMBP49757 651 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 LAPTM4AQ15012 233 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ZNF774Q6NX45 483 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ZNF474Q6S9Z5 364 aaPredicted RBP8.04□□□□□ -1.12
UBR4-201ENST00000375218 LRRC52Q8N7C0 313 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 MS4A10Q96PG2 267 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 FEVQ99581 238 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 WWTR1Q9GZV5 400 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 SEBOXQ9HB31 216 aaPredicted RBP8.04□□□□□ -1.12
UBR4-201ENST00000375218 AP5S1Q9NUS5 200 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 ADAM29Q9UKF5 820 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 NSG2Q9Y328 171 aa8.04□□□□□ -1.12
UBR4-201ENST00000375218 CCKBRP32239 447 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 IKZF1Q13422 519 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 MED21Q13503 144 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 OR5I1Q13606 314 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ZNF77Q15935 545 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 CDNFQ49AH0 187 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 CPTPQ5TA50 214 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 LYSMD4Q5XG99 296 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 OR4P4Q8NGL7 312 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 SLC38A5Q8WUX1 472 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 SDHCQ99643 169 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 Q9N2K0 584 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ACOXLQ9NUZ1 547 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 GNG12Q9UBI6 72 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 LINC00862A6NCI5 91 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 CTSVO60911 334 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 GIPP09681 153 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 NTF4P34130 210 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 GMPRP36959 345 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 RAP1AP62834 184 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 POU2AF1Q16633 256 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ZNF648Q5T619 568 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 CES5AQ6NT32 575 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 PARGQ86W56 976 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ADGRG3Q86Y34 549 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 NPWQ8N729 165 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 AMDHD2Q9Y303 409 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 TIMM13Q9Y5L4 95 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 FAM187AA6NFU0 413 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 NPIPB11E5RHQ5 1161 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 MS4A18H0YCH9 400 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ORM1P02763 201 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 PRKCGP05129 697 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 LGALS7P47929 136 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 FUT6P51993 359 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 PCBP4P57723 403 aaKnown RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 CDHR3Q6ZTQ4 885 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 CLEC20AQ6ZU45 233 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 CMTM1Q8IZ96 169 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 OR2AJ1Q8NGZ0 328 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ZNF564Q8TBZ8 553 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 PIK3IP1Q96FE7 263 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 ABHD14AQ9BUJ0 271 aa8.03□□□□□ -1.12
UBR4-201ENST00000375218 METTL17Q9H7H0 456 aaPredicted RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 GAR1Q9NY12 217 aaKnown RBP8.03□□□□□ -1.12
UBR4-201ENST00000375218 OR6C6A6NF89 314 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 SLC1A7O00341 560 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 TMPRSS2O15393 492 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 RGS16O15492 202 aaPredicted RBP8.02□□□□□ -1.12
UBR4-201ENST00000375218 PRAMEF10O60809 474 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 C6orf47O95873 294 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 PVALBP20472 110 aaPredicted RBP8.02□□□□□ -1.12
UBR4-201ENST00000375218 HTR5AP47898 357 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 ERVPABLB-1P60509 514 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 PPP3R1P63098 170 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 ELOA3BQ3SY89 546 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 TMEM150AQ86TG1 271 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 ELOA3Q8NG57 546 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 ATP5SQ99766 215 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 TPT1P8Q9HAU6 139 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 YARS2Q9Y2Z4 477 aaKnown RBP8.02□□□□□ -1.12
UBR4-201ENST00000375218 SNX10Q9Y5X0 201 aa8.02□□□□□ -1.12
UBR4-201ENST00000375218 KALRNO60229 2985 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms