RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SLC39A7Q92504 469 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 YIPF5Q969M3 257 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CPNE4Q96A23 557 aaPredicted RBP15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NABP1Q96AH0 204 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HAVCR1Q96D42 359 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DCHS1Q96JQ0 3298 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 PBOV1Q9GZY1 135 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ASCL3Q9NQ33 180 aa15.92■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SLC17A2O00624 439 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 EEF1E1O43324 174 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LANCL1O43813 399 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ADRB1P08588 477 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HSD11B1P28845 292 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 GUCA1AP43080 201 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 STARP49675 285 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 GRB2P62993 217 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 AGAP6Q5VW22 663 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF57Q68EA5 555 aaPredicted RBP15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 LINC00696Q6ZRV3 163 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 GALNT16Q8N428 558 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SMIM4Q8WVI0 70 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 AGAP4Q96P64 663 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF416Q9BWM5 594 aa15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 DDX28Q9NUL7 540 aaKnown RBP15.91■□□□□ 0.14
HLA-DQB1-201ENST00000374943 MEGF11A6BM72 1044 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 P2RY10O00398 339 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SULT1B1O43704 296 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NME2P1O60361 137 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CYTIPO60759 359 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 NME2P22392 152 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 CTSSP25774 331 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ZNF84P51523 738 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ART1P52961 327 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HIST1H3AP68431 136 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ENDOGQ14249 297 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HYAL4Q2M3T9 481 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HIST2H3PS2Q5TEC6 136 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HIST2H3AQ71DI3 136 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 SYNPRQ8TBG9 265 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 S100A16Q96FQ6 103 aaKnown RBP15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 HES7Q9BYE0 225 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TTTY12Q9BZ98 90 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 ULBP2Q9BZM5 246 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 TAS2R4Q9NYW5 299 aa15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 KLF13Q9Y2Y9 288 aaPredicted RBP15.9■□□□□ 0.14
HLA-DQB1-201ENST00000374943 OR5H15A6NDH6 313 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RER1O15258 196 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 GLSO94925 669 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RRADP55042 308 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 TAF13Q15543 124 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RAB11BQ15907 218 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SGCAQ16586 387 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 GLT8D1Q68CQ7 371 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 MMP28Q9H239 520 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RNF121Q9H920 327 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PLEKHA1Q9HB21 404 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ZNF275Q9NSD4 429 aaPredicted RBP15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PLA2G3Q9NZ20 509 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SP1P08047 785 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ITGA5P08648 1049 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 LIPCP11150 499 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 LHX2P50458 406 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 MRPS10P82664 201 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 MRPS34P82930 218 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 DGCR2P98153 550 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SLC36A2Q495M3 483 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SLC25A25Q6KCM7 469 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PLET1Q6UQ28 207 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 NKAIN3Q8N8D7 197 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 GJC3Q8NFK1 279 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 C15orf40Q8WUR7 153 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SLC17A5Q9NRA2 495 aa15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
HLA-DQB1-201ENST00000374943 FAM240BA0A1B0GVZ2 78 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 LOC390937A0A1W2PQ73 354 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CD300CQ08708 224 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 GPR176Q14439 515 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 TGIF1Q15583 401 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 AKAP14Q86UN6 197 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ROBO4Q8WZ75 1007 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 HPS1Q92902 700 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 TMEM45BQ96B21 275 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ZFP3Q96NJ6 502 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 C7orf50Q9BRJ6 194 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 MRPS7Q9Y2R9 242 aaKnown RBP15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CACNG2Q9Y698 323 aa15.88■□□□□ 0.13
HLA-DQB1-201ENST00000374943 A0A1B0GTI1 187 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 MEIOCA2RUB1 952 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SYT7O43581 403 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CCL1P22362 96 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 SLC6A1P30531 599 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 PTH2RP49190 550 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 CLDN18P56856 261 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 RIPPLY2Q5TAB7 128 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 ATP1A1-AS1Q5TC04 95 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 FAM27BQ5VT28 67 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 LYPD6Q86Y78 171 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 UBE2J2Q8N2K1 259 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 TMEM251Q8N6I4 163 aa15.87■□□□□ 0.13
HLA-DQB1-201ENST00000374943 OR6M1Q8NGM8 313 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms