RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 SHEQ5VZ18 495 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 LRP11Q86VZ4 500 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 OR6N2Q8NGY6 317 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 SYNPRQ8TBG9 265 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 TMEM163Q8TC26 289 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 IL4I1Q96RQ9 567 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 ATF6BQ99941 703 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 MARCH7Q9H992 704 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 TBCCD1Q9NVR7 557 aa13.74□□□□□ -0.21
HDHD3-202ENST00000374180 ARFGEF3Q5TH69 2177 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 H7C417 338 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 PSKH1P11801 424 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 ZNF250P15622 560 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 SLC2A5P22732 501 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 PPP1CBP62140 327 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 ZNF718Q3SXZ3 478 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 SPATA46Q5T0L3 261 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 SPNS3Q6ZMD2 512 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 RFPL4BQ6ZWI9 263 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 SHFQ7M4L6 423 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 DPY19L4Q7Z388 723 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 TIGD4Q8IY51 512 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 DCLRE1CQ96SD1 692 aaKnown RBP13.73□□□□□ -0.21
HDHD3-202ENST00000374180 TEAD3Q99594 435 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 VRK1Q99986 396 aaPredicted RBP13.73□□□□□ -0.21
HDHD3-202ENST00000374180 DCLRE1BQ9H816 532 aa13.73□□□□□ -0.21
HDHD3-202ENST00000374180 PNRC2Q9NPJ4 139 aaKnown RBP13.73□□□□□ -0.21
HDHD3-202ENST00000374180 F5H5K5 113 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 NDUFS7O75251 213 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 GCH1P30793 250 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 RGS6P49758 472 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 KLF3P57682 345 aaPredicted RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 CDC42P60953 191 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 EIF2B1Q14232 305 aaKnown RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 RSPO1Q2MKA7 263 aaPredicted RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 Q5PR19 223 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 PRSS57Q6UWY2 283 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 OR10S1Q8NGN2 331 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 SLC25A40Q8TBP6 338 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 IPCEF1Q8WWN9 437 aaPredicted RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 SPTSSAQ969W0 71 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 MARS2Q96GW9 593 aaKnown RBP13.72□□□□□ -0.21
HDHD3-202ENST00000374180 OR2J1Q9GZK6 312 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 TOR3AQ9H497 397 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 DYNLRB1Q9NP97 96 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 CENPMQ9NSP4 180 aa13.72□□□□□ -0.21
HDHD3-202ENST00000374180 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 SELENOFO60613 162 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 CLPTM1O96005 669 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TUBG1P23258 451 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 PPOXP50336 477 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TPTEP56180 551 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TAF13Q15543 124 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TRIP10Q15642 601 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 LRRC36Q1X8D7 754 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 LCN1P1Q5VSP4 162 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 AADACL4Q5VUY2 407 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 NXNL2Q5VZ03 156 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 MEPCEQ7L2J0 689 aaKnown RBP13.71□□□□□ -0.21
HDHD3-202ENST00000374180 OR8J1Q8NGP2 316 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 KLF14Q8TD94 323 aaPredicted RBP13.71□□□□□ -0.21
HDHD3-202ENST00000374180 ST7LQ8TDW4 575 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 SLAMF6Q96DU3 332 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 COG8Q96MW5 612 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 BARX1Q9HBU1 254 aaPredicted RBP13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TUBG2Q9NRH3 451 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 DDX28Q9NUL7 540 aaKnown RBP13.71□□□□□ -0.21
HDHD3-202ENST00000374180 IMPAD1Q9NX62 359 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 TAAR3PQ9P1P4 343 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 MYEF2Q9P2K5 600 aaKnown RBP13.71□□□□□ -0.21
HDHD3-202ENST00000374180 GPR160Q9UJ42 338 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 STARD10Q9Y365 291 aa13.71□□□□□ -0.21
HDHD3-202ENST00000374180 HIVEP1P15822 2718 aa13.71□□□□□ -0.22
HDHD3-202ENST00000374180 IGLV3-9A0A075B6K5 115 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 CCDC182A6NF36 153 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 M0R233 179 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 IGHV4-39P01824 125 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 ADRA2AP08913 450 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 NAA10P41227 235 aaPredicted RBP13.7□□□□□ -0.22
HDHD3-202ENST00000374180 NUDT6P53370 316 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 MOGQ16653 247 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 KRTAP27-1Q3LI81 207 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 ZNF454Q8N9F8 522 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 WFDC11Q8NEX6 87 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 OR5L1Q8NGL2 311 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 OTOSQ8NHW6 89 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 FAM81AQ8TBF8 368 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 THEM6Q8WUY1 208 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 TRUB1Q8WWH5 349 aaKnown RBP13.7□□□□□ -0.22
HDHD3-202ENST00000374180 APOBEC3DQ96AK3 386 aaPredicted RBP13.7□□□□□ -0.22
HDHD3-202ENST00000374180 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 ABHD6Q9BV23 337 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 RAB1BQ9H0U4 201 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 MS4A5Q9H3V2 200 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 SLCO1C1Q9NYB5 712 aa13.7□□□□□ -0.22
HDHD3-202ENST00000374180 SLC22A31A6NKX4 558 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms