RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 GJE1A6NN92 205 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 SULT1B1O43704 296 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 UCHL1P09936 223 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 RNF224P0DH78 156 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 IFI30P13284 250 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 TACR3P29371 465 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 POLR2HP52434 150 aaKnown RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 OR10A3P58181 314 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 MRPS10P82664 201 aaKnown RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 ZNF85Q03923 595 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 MFSD13AQ14CX5 517 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 UBE2NLQ5JXB2 153 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 LSMEM1Q8N8F7 131 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 SLC25A43Q8WUT9 341 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 CHRNA9Q9UGM1 479 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 SIGLEC7Q9Y286 467 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 LRRK2Q5S007 2527 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 TMED7-TICAM2A0A0A6YYA0 188 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 MBD3L4A6NDZ8 208 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 MBD3L3A6NE82 208 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 MBD3L5A6NJ08 208 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 TNFSF11O14788 317 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 IFNGP01579 166 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 ZNF3P17036 446 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 CXCL3P19876 107 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 HTR2AP28223 471 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 TMEM176BQ3YBM2 270 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 METTL11BQ5VVY1 283 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 ZNF613Q6PF04 617 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 CHMP1BQ7LBR1 199 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 SLC38A6Q8IZM9 456 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 SPICQ8N5J4 248 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 POMGNT2Q8NAT1 580 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 OR2V1Q8NHB1 315 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 MBD3L2Q8NHZ7 208 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 C15orf40Q8WUR7 153 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 GIMAP1Q8WWP7 306 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 RND1Q92730 232 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 C4orf36Q96KX1 117 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 ZNF436Q9C0F3 470 aaPredicted RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 FBXL3Q9UKT7 428 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 TMED7Q9Y3B3 224 aa18.16■□□□□ 0.5
SYNC-201ENST00000373484 INTS1Q8N201 2190 aaKnown RBP18.16■□□□□ 0.5
SYNC-201ENST00000373484 E9PI62 339 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 ZNF593O00488 134 aaPredicted RBP18.15■□□□□ 0.5
SYNC-201ENST00000373484 GPRIN2O60269 458 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 PTP4A3O75365 173 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 MAKP20794 623 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 TIMP3P35625 211 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 EIF1AXP47813 144 aaKnown RBP18.15■□□□□ 0.5
SYNC-201ENST00000373484 SLC3A1Q07837 685 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 SLC25A35Q3KQZ1 300 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 PIAS4Q8N2W9 510 aaPredicted RBP18.15■□□□□ 0.5
SYNC-201ENST00000373484 OR10D3Q8NH80 312 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 GHSRQ92847 366 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 C3orf49Q96BT1 292 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 SMIM19Q96E16 107 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 ZNF845Q96IR2 970 aaPredicted RBP18.15■□□□□ 0.5
SYNC-201ENST00000373484 ZNF559Q9BR84 538 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 GSX2Q9BZM3 304 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 MED31Q9Y3C7 131 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 DOPEY1Q5JWR5 2465 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 COL12A1Q99715 3063 aa18.15■□□□□ 0.5
SYNC-201ENST00000373484 OR7A10O76100 309 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 TOXO94900 526 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 FKBP2P26885 142 aaKnown RBP18.14■□□□□ 0.5
SYNC-201ENST00000373484 SRP9P49458 86 aaKnown RBP18.14■□□□□ 0.5
SYNC-201ENST00000373484 CCR9P51686 369 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 MAP2K6P52564 334 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 DGCR2P98153 550 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 PUDPQ08623 228 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 EXOSC2Q13868 293 aaKnown RBP18.14■□□□□ 0.5
SYNC-201ENST00000373484 GGTLC2Q14390 218 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 OR1Q1Q15612 314 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 PDSS1Q5T2R2 415 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 RIPPLY2Q5TAB7 128 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 PLXDC2Q6UX71 529 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 UNQ9370/PRO34162Q6UXP9 181 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 COMMD7Q86VX2 200 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 OR6V1Q8N148 313 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 ITLN2Q8WWU7 325 aaPredicted RBP18.14■□□□□ 0.5
SYNC-201ENST00000373484 WNT2BQ93097 391 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 TMPRSS13Q9BYE2 586 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 TRIM2Q9C040 744 aa18.14■□□□□ 0.5
SYNC-201ENST00000373484 J3QLW9 94 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 CD3GP09693 182 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 OR2T7P0C7T2 308 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 ZNF19P17023 458 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 ATF1P18846 271 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 CEACAM8P31997 349 aaPredicted RBP18.14■□□□□ 0.49
SYNC-201ENST00000373484 RBM34P42696 430 aaKnown RBP18.14■□□□□ 0.49
SYNC-201ENST00000373484 ZNF81P51508 661 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 GBX2P52951 348 aaPredicted RBP18.14■□□□□ 0.49
SYNC-201ENST00000373484 SGCBQ16585 318 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 AANATQ16613 207 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 RPL22L1Q6P5R6 122 aaKnown RBP18.14■□□□□ 0.49
SYNC-201ENST00000373484 C9orf106Q8NAJ2 232 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 OR2T27Q8NH04 317 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 BPIFA2Q96DR5 249 aa18.14■□□□□ 0.49
SYNC-201ENST00000373484 IFT27Q9BW83 186 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms