RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 BARX1Q9HBU1 254 aaPredicted RBP11.39□□□□□ -0.59
CTPS1-202ENST00000372621 SLC2A4RGQ9NR83 387 aa11.39□□□□□ -0.59
CTPS1-202ENST00000372621 GLS2Q9UI32 602 aa11.39□□□□□ -0.59
CTPS1-202ENST00000372621 TNFSF18Q9UNG2 199 aa11.39□□□□□ -0.59
CTPS1-202ENST00000372621 CEP290O15078 2479 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 TMEM269A0A1B0GVZ9 245 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 NPIPB13A6NJU9 1138 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 NPIPB4C9JG80 1138 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 UBBP0CG47 229 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 UBCP0CG48 685 aaKnown RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF823P16415 610 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 NAGAP17050 411 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 CD27P26842 260 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 MMP16P51512 607 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 RPS27AP62979 156 aaKnown RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 UBA52P62987 128 aaKnown RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 QRFPP83859 136 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 SQSTM1Q13501 440 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 TMEM244Q5VVB8 128 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 SLC25A42Q86VD7 318 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 DEFB119Q8N690 84 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 MRPS24Q96EL2 167 aaKnown RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 LDAHQ9H6V9 325 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 CNTD2Q9H8S5 307 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 RASL12Q9NYN1 266 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 TMEM200CA6NKL6 621 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 LMO7DNF2Z398 122 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 IL2RAP01589 272 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 ZBTB25P24278 435 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 UNC119Q13432 240 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 MEF2DQ14814 521 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 RAB30Q15771 203 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 LANCL3Q6ZV70 420 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 ACBD4Q8NC06 268 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 RNF133Q8WVZ7 376 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 ARL5BQ96KC2 179 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 TPSD1Q9BZJ3 242 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 FAM206AQ9NX38 181 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 RAB22AQ9UL26 194 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 FARSAQ9Y285 508 aaKnown RBP11.38□□□□□ -0.59
CTPS1-202ENST00000372621 ADAMTS20P59510 1910 aa11.38□□□□□ -0.59
CTPS1-202ENST00000372621 P2RY10O00398 339 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 TSPAN4O14817 238 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 CD34P28906 385 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 CAPZA1P52907 286 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 SCGB2B2Q4G0G5 96 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 C11orf87Q6NUJ2 197 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 FJX1Q86VR8 437 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF584Q8IVC4 421 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 PRSS58Q8IYP2 241 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 D2HGDHQ8N465 521 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 RELL2Q8NC24 303 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF248Q8NDW4 579 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 MFSD8Q8NHS3 518 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 MKL2Q9ULH7 1088 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ASXL3Q9C0F0 2248 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 DISC1C4P0D8 188 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 HLA-AP01891 365 aaKnown RBP11.37□□□□□ -0.59
CTPS1-202ENST00000372621 FOLR1P15328 257 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 DAP3P51398 398 aaKnown RBP11.37□□□□□ -0.59
CTPS1-202ENST00000372621 OR1D5P58170 312 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF273Q14593 569 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 RAB12Q6IQ22 244 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 DNM1P34Q6PK57 102 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 CARFQ8N187 725 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 PXT1Q8NFP0 134 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ZBTB8AQ96BR9 441 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 PRRT1Q99946 306 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 RNF222A6NCQ9 220 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 RHPN2P1A8MT19 583 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 TTRP02766 147 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 HSD11B1P28845 292 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 MOB3CQ70IA8 216 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 H1FNTQ75WM6 255 aaPredicted RBP11.37□□□□□ -0.59
CTPS1-202ENST00000372621 LYG2Q86SG7 212 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 MISPQ8IVT2 679 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 TMEM234Q8WY98 164 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 ST8SIA1Q92185 356 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 B3GNT4Q9C0J1 378 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 DNTTIP1Q9H147 329 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 SEMA5BQ9P283 1151 aa11.37□□□□□ -0.59
CTPS1-202ENST00000372621 IGHV1OR21-1A0A087WYE8 117 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 METTL21EPA6NDL7 271 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 METTL12A8MUP2 240 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 NPIPA5E9PKD4 350 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF354AO60765 605 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF217O75362 1048 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 OR2F2O95006 317 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CTRB1P17538 263 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
CTPS1-202ENST00000372621 BDKRB2P30411 391 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 RNF4P78317 190 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 OR2F1Q13607 317 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CTRB2Q6GPI1 263 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 C3orf33Q6P1S2 294 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 CD163Q86VB7 1156 aa11.36□□□□□ -0.59
CTPS1-202ENST00000372621 ZDHHC22Q8N966 263 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms