RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 SMIM18P0DKX4 95 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 APEHP13798 732 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 AGAP20933 346 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 NPY4RP50391 375 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 F2RL1P55085 397 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ARPC4P59998 168 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CXCR4P61073 352 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 RPL27P61353 136 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 HSF1Q00613 529 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PUDPQ08623 228 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 CRMP1Q14194 572 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 BCL2A1Q16548 175 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 MESTQ5EB52 335 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ARMC4Q5T2S8 1044 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SFRP4Q6FHJ7 346 aaPredicted RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 C19orf48Q6RUI8 117 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PAQR6Q6TCH4 344 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 B3GLCTQ6Y288 498 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC43A2Q8N370 569 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ARIH2OSQ8N7S6 290 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ADPRHL1Q8NDY3 354 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SDR9C7Q8NEX9 313 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR52E2Q8NGJ4 325 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OR2V1Q8NHB1 315 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 R3HDM4Q96D70 268 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 LRR1Q96L50 414 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 OXGR1Q96P68 337 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 SLC38A2Q96QD8 506 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 NMNAT3Q96T66 252 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TIMP4Q99727 224 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 YTHDF1Q9BYJ9 559 aaKnown RBP3.13□□□□□ -1.91
MCF2-202ENST00000370573 NMNAT2Q9BZQ4 307 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 TXNIPQ9H3M7 391 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 FN3KQ9H479 309 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 DUSP21Q9H596 190 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ZNF696Q9H7X3 374 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PLCXD1Q9NUJ7 323 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 FKBP14Q9NWM8 211 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 KLHL13Q9P2N7 655 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 ERVK-18Q9QC07 812 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 PSORS1C1Q9UIG5 152 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 NPIPA1Q9UND3 350 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 BAIAP2Q9UQB8 552 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 B3GALT5Q9Y2C3 310 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 COMMD3-BMI1R4GMX3 469 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 USP24Q9UPU5 2620 aa3.13□□□□□ -1.91
MCF2-202ENST00000370573 A0A1W2PNV4 684 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MAGEA13PA6NCF6 341 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TMEM8BA6NDV4 472 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CCDC182A6NF36 153 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 WIPF3A6NGB9 483 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 RIIAD1A6NNX1 92 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF716A6NP11 495 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 H7C1C5 153 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 DCTN6O00399 190 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MPZL2O60487 215 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ACTL6AO96019 429 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 IGHMP01871 453 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 GYPBP06028 91 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CLUP10909 449 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CPN1P15169 458 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SLC2A5P22732 501 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 APOBEC3AP31941 199 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ACVR1BP36896 505 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 LIPAP38571 399 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 LCN6P62502 163 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 KRR1Q13601 381 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 MELKQ14680 651 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 SLC17A1Q14916 467 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 KCTD21Q4G0X4 260 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 IGSF11Q5DX21 431 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 RBM48Q5RL73 367 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF324BQ6AW86 544 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 TMEM225Q6GV28 225 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 THOC7Q6I9Y2 204 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ARHGAP11AQ6P4F7 1023 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 LEG1Q6P5S2 330 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PET117Q6UWS5 81 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NCCRP1Q6ZVX7 275 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 SLC35D2Q76EJ3 337 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 FAM98AQ8NCA5 519 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 OR9Q1Q8NGQ5 310 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 C9orf43Q8TAL5 461 aaPredicted RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 ASB10Q8WXI3 467 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PNPLA2Q96AD5 504 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 PLEKHA8Q96JA3 519 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TSSK2Q96PF2 358 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 ZNF385AQ96PM9 386 aaKnown RBP3.12□□□□□ -1.91
MCF2-202ENST00000370573 PRR25Q96S07 402 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 TUBA1CQ9BQE3 449 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 EMC6Q9BV81 110 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 YIPF3Q9GZM5 350 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 EXO5Q9H790 373 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 CLN6Q9NWW5 311 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 MED29Q9NX70 200 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 NLKQ9UBE8 527 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 UPB1Q9UBR1 384 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 KLHL21Q9UJP4 597 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 BSNQ9UPA5 3926 aa3.12□□□□□ -1.91
MCF2-202ENST00000370573 KIAA1549Q9HCM3 1950 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms