RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SMPD3Q9NY59 655 aaPredicted RBP12.77□□□□□ -0.37
COL9A1-204ENST00000370496 DUSP13Q9UII6 198 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 GMPPBQ9Y5P6 360 aa12.77□□□□□ -0.37
COL9A1-204ENST00000370496 CCDC182A6NF36 153 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 SLC22A31A6NKX4 558 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF878C9JN71 531 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 F5H5K5 113 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 OVOL3O00110 214 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 ICMTO60725 284 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 MRPL3P09001 348 aaKnown RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 GCH1P30793 250 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 RGS6P49758 472 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 KLF3P57682 345 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 PCK2Q16822 640 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 Q5PR19 223 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 LPCAT4Q643R3 524 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 SPATC1Q76KD6 591 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 BCDIN3DQ7Z5W3 292 aaKnown RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 C1orf174Q8IYL3 243 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 OR8J1Q8NGP2 316 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 SYNPRQ8TBG9 265 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 SLAMF6Q96DU3 332 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 HRASLS5Q96KN8 279 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 DCLRE1CQ96SD1 692 aaKnown RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 CNN2Q99439 309 aaKnown RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 VCXQ9H320 206 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 PNRC2Q9NPJ4 139 aaKnown RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 CENPMQ9NSP4 180 aa12.76□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF701Q9NV72 531 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 FBXO9Q9UK97 447 aaPredicted RBP12.76□□□□□ -0.37
COL9A1-204ENST00000370496 H7C417 338 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 M0R135 149 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 M0R233 179 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 SLC6A9P48067 706 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 NKPD1Q17RQ9 610 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 MSMPQ1L6U9 139 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 SWI5Q1ZZU3 235 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 MST1LQ2TV78 715 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF718Q3SXZ3 478 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 MEPCEQ7L2J0 689 aaKnown RBP12.75□□□□□ -0.37
COL9A1-204ENST00000370496 PACRGLQ8N7B6 248 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF555Q8NEP9 628 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 OR10S1Q8NGN2 331 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 SLC25A40Q8TBP6 338 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 ST7LQ8TDW4 575 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 SNX33Q8WV41 574 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 IPCEF1Q8WWN9 437 aaPredicted RBP12.75□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF799Q96GE5 643 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 COG8Q96MW5 612 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 RDH12Q96NR8 316 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 VRK1Q99986 396 aaPredicted RBP12.75□□□□□ -0.37
COL9A1-204ENST00000370496 OR2J1Q9GZK6 312 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 CXXC4Q9H2H0 198 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 DDX28Q9NUL7 540 aaKnown RBP12.75□□□□□ -0.37
COL9A1-204ENST00000370496 TBCCD1Q9NVR7 557 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 DNAJC27Q9NZQ0 273 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
COL9A1-204ENST00000370496 H3BSA7 217 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 J3QW42 95 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 NGFP01138 241 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 LYNP07948 512 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 ZNF250P15622 560 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 PAX1P15863 534 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 HSD11B1P28845 292 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 ALDH3B1P43353 468 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 SLC15A1P46059 708 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 PPOXP50336 477 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 TPTEP56180 551 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 GRB2P62993 217 aaKnown RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 GGTLC2Q14390 218 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 MAD2L1BPQ15013 274 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 SLC16A9Q7RTY1 509 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 LRP11Q86VZ4 500 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 OTOSQ8NHW6 89 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 RFKQ969G6 155 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 TEAD3Q99594 435 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 ABHD6Q9BV23 337 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 BARX1Q9HBU1 254 aaPredicted RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 MYEF2Q9P2K5 600 aaKnown RBP12.74□□□□□ -0.37
COL9A1-204ENST00000370496 GPR160Q9UJ42 338 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 LAMP5Q9UJQ1 280 aa12.74□□□□□ -0.37
COL9A1-204ENST00000370496 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 IGHV4-39P01824 125 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 ACSM4P0C7M7 580 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 MPV17P39210 176 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 EVX1P49640 407 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 NUDT6P53370 316 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 EFNB1P98172 346 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 ALKBH6Q3KRA9 238 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 OGFRL1Q5TC84 451 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 OR5L1Q8NGL2 311 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 KLF14Q8TD94 323 aaPredicted RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 THEM6Q8WUY1 208 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 RNF133Q8WVZ7 376 aa12.73□□□□□ -0.37
COL9A1-204ENST00000370496 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
COL9A1-204ENST00000370496 MARS2Q96GW9 593 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms