RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CEACAM18A8MTB9 384 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 TMEM178BH3BS89 294 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 FFAR1O14842 300 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 SLC16A7O60669 478 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 GPANK1O95872 356 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 CYB5R3P00387 301 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 CD14P08571 375 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 DBHP09172 617 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 RPS2P15880 293 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 CTLA4P16410 223 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 TUBG1P23258 451 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 MDH2P40926 338 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 KRR1Q13601 381 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 HLXQ14774 488 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 ZBED5Q49AG3 693 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 IFI44LQ53G44 452 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 OR2T2Q6IF00 324 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 MBOAT2Q6ZWT7 520 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 FKBP9P1Q75LS8 142 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 RRM2BQ7LG56 351 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 FAM122BQ7Z309 247 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 HDXQ7Z353 690 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 RNF113BQ8IZP6 322 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 MUC20Q8N307 709 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 OR10AD1Q8NGE0 317 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 OR52E2Q8NGJ4 325 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 PTP4A1Q93096 173 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 RCN3Q96D15 328 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 RASD2Q96D21 266 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 COG8Q96MW5 612 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 SSBP3Q9BWW4 388 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 NDEL1Q9GZM8 345 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 SYT4Q9H2B2 425 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 ZNF696Q9H7X3 374 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 UNKLQ9H9P5 680 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 ZMAT3Q9HA38 289 aaKnown RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 GCM1Q9NP62 436 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 TUBG2Q9NRH3 451 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 MRGBPQ9NV56 204 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 CMTM6Q9NX76 183 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 ASH2LQ9UBL3 628 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 LRCH1Q9Y2L9 728 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 COA3Q9Y2R0 106 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 POLR1DQ9Y2S0 133 aa8.68□□□□□ -1.02
CLRN3-201ENST00000368671 SOX21Q9Y651 276 aaPredicted RBP8.68□□□□□ -1.02
CLRN3-201ENST00000368671 TRAV40A0A0B4J280 105 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 MDFIC2A0A1B0GVS7 189 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 H0YL77 283 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 CXCR6O00574 342 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 SOCS2O14508 198 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 IMPA2O14732 288 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 GSTA4O15217 222 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 KHDRBS3O75525 346 aaKnown RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 GHRHP01286 108 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 RNASE1P07998 156 aaKnown RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 WNT2P09544 360 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 IGHV4-38-2P0DP08 117 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 RAC2P15153 192 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 ZNF26P17031 533 aaPredicted RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 CD80P33681 288 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 CENPAP49450 140 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 GNB2P62879 340 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 CCDC92Q53HC0 331 aaPredicted RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 SLC27A4Q6P1M0 643 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 BTNL3Q6UXE8 466 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 NBEAL1Q6ZS30 2694 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 TMPRSS11FQ6ZWK6 438 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 KLBQ86Z14 1044 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 POU5F2Q8N7G0 328 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 OR1F12Q8NHA8 337 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 SLC25A28Q96A46 364 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 FAM46AQ96IP4 442 aaKnown RBP8.67□□□□□ -1.02
CLRN3-201ENST00000368671 MEGF10Q96KG7 1140 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 FGFR1OP2Q9NVK5 253 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 CAPN7Q9Y6W3 813 aa8.67□□□□□ -1.02
CLRN3-201ENST00000368671 OR6C6A6NF89 314 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 F5H5P2 479 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 RER1O15258 196 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 AHCYL1O43865 530 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 NDUFB2O95178 105 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 SERPINA1P01009 418 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 SDHAP31040 664 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 MTNR1AP48039 350 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 SRP9P49458 86 aaKnown RBP8.66□□□□□ -1.02
CLRN3-201ENST00000368671 RGS6P49758 472 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 LSM6P62312 80 aaKnown RBP8.66□□□□□ -1.02
CLRN3-201ENST00000368671 IL13RA1P78552 427 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 LIPEQ05469 1076 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 PAX8Q06710 450 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 SLC9A3R2Q15599 337 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 FAM201AQ5SY85 155 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 CGB2Q6NT52 195 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 CBLL1Q75N03 491 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 MOGAT3Q86VF5 341 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 CYP4Z1Q86W10 505 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 GLB1L2Q8IW92 636 aa8.66□□□□□ -1.02
CLRN3-201ENST00000368671 BHLHE23Q8NDY6 225 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms