RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZNF878C9JN71 531 aa12□□□□□ -0.49
TPM3-211ENST00000368531 LCKP06239 509 aa12□□□□□ -0.49
TPM3-211ENST00000368531 NR4A1P22736 598 aa12□□□□□ -0.49
TPM3-211ENST00000368531 THBS4P35443 961 aa12□□□□□ -0.49
TPM3-211ENST00000368531 WNT5AP41221 380 aa12□□□□□ -0.49
TPM3-211ENST00000368531 SLC6A9P48067 706 aa12□□□□□ -0.49
TPM3-211ENST00000368531 FABP6P51161 128 aa12□□□□□ -0.49
TPM3-211ENST00000368531 CXCR4P61073 352 aa12□□□□□ -0.49
TPM3-211ENST00000368531 ERVS71-1P61550 626 aa12□□□□□ -0.49
TPM3-211ENST00000368531 ECH1Q13011 328 aa12□□□□□ -0.49
TPM3-211ENST00000368531 RSPO1Q2MKA7 263 aaPredicted RBP12□□□□□ -0.49
TPM3-211ENST00000368531 ZNF672Q499Z4 452 aaPredicted RBP12□□□□□ -0.49
TPM3-211ENST00000368531 KRT77Q7Z794 578 aa12□□□□□ -0.49
TPM3-211ENST00000368531 HIST2H2ABQ8IUE6 130 aaPredicted RBP12□□□□□ -0.49
TPM3-211ENST00000368531 ZNF101Q8IZC7 436 aa12□□□□□ -0.49
TPM3-211ENST00000368531 ABHD4Q8TB40 342 aa12□□□□□ -0.49
TPM3-211ENST00000368531 LGALS12Q96DT0 336 aa12□□□□□ -0.49
TPM3-211ENST00000368531 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
TPM3-211ENST00000368531 LIME1Q9H400 295 aa12□□□□□ -0.49
TPM3-211ENST00000368531 SLCO1C1Q9NYB5 712 aa12□□□□□ -0.49
TPM3-211ENST00000368531 IKZF2Q9UKS7 526 aa12□□□□□ -0.49
TPM3-211ENST00000368531 FZR1Q9UM11 496 aa12□□□□□ -0.49
TPM3-211ENST00000368531 RPL36Q9Y3U8 105 aaKnown RBP12□□□□□ -0.49
TPM3-211ENST00000368531 A0A1W2PQL4 384 aaPredicted RBP11.99□□□□□ -0.49
TPM3-211ENST00000368531 PRR32B1ATL7 298 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 HS3ST1O14792 307 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 XPNPEP2O43895 674 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 GPRIN2O60269 458 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 FAM20BO75063 409 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 NGFP01138 241 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 OR2T7P0C7T2 308 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 SLC2A1P11166 492 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 MYF6P23409 242 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 HSD11B1P28845 292 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 SLC15A1P46059 708 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 UCP2P55851 309 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 TPTEP56180 551 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 SPATA46Q5T0L3 261 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 LAIR2Q6ISS4 152 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 SSX6Q7RTT6 188 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 ZNF283Q8N7M2 679 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 BPIFB6Q8NFQ5 453 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 OR52I1Q8NGK6 324 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 OR1J1Q8NGS3 322 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 OR2T27Q8NH04 317 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 RNF133Q8WVZ7 376 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 SPTSSAQ969W0 71 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 KCNJ15Q99712 375 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 RHNO1Q9BSD3 238 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 RASSF4Q9H2L5 321 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 PLEKHF2Q9H8W4 249 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 BRD7Q9NPI1 651 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 CA10Q9NS85 328 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 DDX28Q9NUL7 540 aaKnown RBP11.99□□□□□ -0.49
TPM3-211ENST00000368531 RAB26Q9ULW5 256 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 TMEM14AQ9Y6G1 99 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 RAI1Q7Z5J4 1906 aaPredicted RBP11.99□□□□□ -0.49
TPM3-211ENST00000368531 CACNA1DQ01668 2161 aa11.99□□□□□ -0.49
TPM3-211ENST00000368531 ADGRG4Q8IZF6 3080 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 DAPL1A0PJW8 107 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 M0R135 149 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 SMPD2O60906 423 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 LCATP04180 440 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ACSM4P0C7M7 580 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 OPRL1P41146 370 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 RAD52P43351 418 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 CX3CR1P49238 355 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 PPP1CBP62140 327 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 GRB2P62993 217 aaKnown RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 NKX6-1P78426 367 aaPredicted RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 KLHL22Q53GT1 634 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 KCTD18Q6PI47 426 aaPredicted RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 ARL9Q6T311 187 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ZNF322Q6U7Q0 402 aaPredicted RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 RFPL4BQ6ZWI9 263 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 FBLIM1Q8WUP2 373 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ASB17Q8WXJ9 295 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 FBXW5Q969U6 566 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ZNF799Q96GE5 643 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 OR8B4Q96RC9 309 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 MNTQ99583 582 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 DHRS9Q9BPW9 319 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ANKRD60Q9BZ19 345 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ELOVL3Q9HB03 270 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ATPIF1Q9UII2 106 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 EXOGQ9Y2C4 368 aaKnown RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 MYRFQ9Y2G1 1151 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 STARD10Q9Y365 291 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 LRP12Q9Y561 859 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 ANKHD1Q8IWZ3 2542 aaKnown RBP11.98□□□□□ -0.49
TPM3-211ENST00000368531 DSCAMO60469 2012 aa11.98□□□□□ -0.49
TPM3-211ENST00000368531 PHYHO14832 338 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 ANXA2P07355 339 aaKnown RBP11.97□□□□□ -0.49
TPM3-211ENST00000368531 OR4A8P0C604 315 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 PCSK6P29122 969 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 GLRXP35754 106 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 ZNF85Q03923 595 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 MSMPQ1L6U9 139 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
TPM3-211ENST00000368531 C6orf141Q5SZD1 244 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms