RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SYPL1Q16563 259 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 C18orf63Q68DL7 685 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 KCTD11Q693B1 232 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ETFBKMTQ8IXQ9 262 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 BVESQ8NE79 360 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR13C4Q8NGS5 318 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 VAMP8Q9BV40 100 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NRASP01111 189 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HRASP01112 189 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PF4V1P10720 104 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ENGP17813 658 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CD1BP29016 333 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PRDX3P30048 256 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 DMRTC1Q5HYR2 192 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PHYHD1Q5SRE7 291 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CEACAM20Q6UY09 585 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZFP82Q8N141 532 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR4D6Q8NGJ1 314 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ASB11Q8WXH4 323 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GPR20Q99678 358 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SLC25A2Q9BXI2 301 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ANKRD30BLA7E2S9 258 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 DSCR3O14972 297 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RAC1P63000 192 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GALPQ9UBC7 116 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ELFN1P0C7U0 828 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR7D2Q96RA2 312 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SARGQ9BW04 601 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OBP2BQ9NPH6 170 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HPP00738 406 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SSR2P43308 183 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ENPP2Q13822 863 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PLXDC2Q6UX71 529 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MTCH1Q9NZJ7 389 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 WNT6Q9Y6F9 365 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 C5orf49A4QMS7 147 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FAM171A2A8MVW0 826 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CMKLR1Q99788 373 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FAAP24Q9BTP7 215 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NMNAT2Q9BZQ4 307 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RNF122Q9H9V4 155 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CCDC187A0A096LP49 1063 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GGTLC2Q14390 218 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 VWA1Q6PCB0 445 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 B3GNT9Q6UX72 402 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 LYG2Q86SG7 212 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR13C9Q8NGT0 318 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SH3RF2Q8TEC5 729 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GCDHQ92947 438 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CD84Q9UIB8 345 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CLTCQ00610 1675 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR6C76A6NM76 312 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GDF5P43026 501 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CXCL12P48061 93 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 HFEQ30201 348 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF626Q68DY1 528 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TCF23Q7RTU1 214 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TRBV24-1A0A075B6N3 115 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 KIR2DS5A0A0G2JLQ3 304 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 A0A0G2JNG1 304 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 KIR2DS3K7RE56 304 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NXPH2O95156 264 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 UFM1P61960 85 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 KIR2DS5Q14953 304 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 DTD2Q96FN9 168 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CD5P06127 495 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 AGTR2P50052 363 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TAS2R38P59533 333 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 DCDP81605 110 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GAMTQ14353 236 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 VSX1Q9NZR4 365 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 POLDIP2Q9Y2S7 368 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2J1Q9Y385 318 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 GPSM3Q9Y4H4 160 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CTHP32929 405 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 UCP3P55916 312 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 APOBEC3HQ6NTF7 200 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MBOAT2Q6ZWT7 520 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NDUFAF3Q9BU61 184 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PRR36Q9H6K5 1346 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TEX50A0A1B0GTY4 177 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 TNFRSF10CO14798 259 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ORM2P19652 201 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ASIPP42127 132 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 RPS23P62266 143 aaKnown RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SOWAHAQ2M3V2 549 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ATP5L2Q7Z4Y8 100 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SLAIN1Q8ND83 568 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 NUDT10Q8NFP7 164 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 CXCL16Q9H2A7 254 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 KLF2Q9Y5W3 355 aaPredicted RBP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 VSTM2BA6NLU5 285 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 ODF4Q2M2E3 257 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 FDX2Q6P4F2 183 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 OR10A7Q8NGE5 316 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SLC45A2Q9UMX9 530 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 MOB4Q9Y3A3 225 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 PUS1Q9Y606 427 aaKnown RBP eCLIP3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SULT1A3P0DMM9 295 aa3.43□□□□□ -1.86
SYNE1-207ENST00000367255 SULT1A4P0DMN0 295 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms