RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 ZNF75AQ96N20 296 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 MOGAT1Q96PD6 335 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 PLA2G12AQ9BZM1 189 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 BCL2L14Q9BZR8 327 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 RACGAP1Q9H0H5 632 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 KCNN2Q9H2S1 579 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 NANSQ9NR45 359 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 DECR2Q9NUI1 292 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 TREM2Q9NZC2 230 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 ZNF224Q9NZL3 707 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 TAAR3PQ9P1P4 343 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 FZR1Q9UM11 496 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 TMEM5Q9Y2B1 443 aa10.61□□□□□ -0.71
MRPL55-209ENST00000366735 J3QLI3 93 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 IGF2P01344 180 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 IGHG1P01857 330 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 HIST1H2ABP04908 130 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 LCKP06239 509 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 GATA3P23771 443 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 COL8A2P25067 703 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 COMPP49747 757 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 CXCR4P61073 352 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 TOP3AQ13472 1001 aaPredicted RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 PTGES3Q15185 160 aaKnown RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 MSMPQ1L6U9 139 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 SLX4IPQ5VYV7 408 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 TMPRSS11FQ6ZWK6 438 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 HIST3H2AQ7L7L0 130 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 CPEB3Q8NE35 698 aaKnown RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 ZNF519Q8TB69 540 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 HIST1H2ACQ93077 130 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 TMEM54Q969K7 222 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 YIPF5Q969M3 257 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 TXNDC15Q96J42 360 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 GPA33Q99795 319 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 SLC19A3Q9BZV2 496 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 ZNF665Q9H7R5 613 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 HINT3Q9NQE9 182 aaKnown RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 NKIRAS2Q9NYR9 191 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 MYEF2Q9P2K5 600 aaKnown RBP10.6□□□□□ -0.71
MRPL55-209ENST00000366735 PFDN2Q9UHV9 154 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 MED31Q9Y3C7 131 aa10.6□□□□□ -0.71
MRPL55-209ENST00000366735 IGLV3-9A0A075B6K5 115 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 IGHV1-69-2A0A0G2JMI3 117 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 TRIM64CA6NLI5 447 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 MCIDASD6RGH6 385 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 DHHO43323 396 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 RP2O75695 350 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 NCR1O76036 304 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 MPZL1O95297 269 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 BCL10O95999 233 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 CCDC159P0C7I6 412 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 FAM157BP0CG42 384 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SMIM18P0DKX4 95 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 NR2C1P13056 603 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 ZNF250P15622 560 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 APLNRP35414 380 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 CLRN1P58418 232 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 CSNK2BP67870 215 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SLC3A1Q07837 685 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 ZP4Q12836 540 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 CDK5R2Q13319 367 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 APOFQ13790 326 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 HFEQ30201 348 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 LAIR2Q6ISS4 152 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SLC16A14Q7RTX9 510 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 NANOGNBQ7Z5D8 188 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 C1QL2Q7Z5L3 287 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 LRP11Q86VZ4 500 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SKA3Q8IX90 412 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 BPIFB2Q8N4F0 458 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 RHOXF1Q8NHV9 184 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 RAB1CQ92928 201 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 FAM46AQ96IP4 442 aaKnown RBP10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SAP30LQ9HAJ7 183 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 SLC25A19Q9HC21 320 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 TMEM38BQ9NVV0 291 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 ZNF229Q9UJW7 825 aa10.59□□□□□ -0.71
MRPL55-209ENST00000366735 CENPBD1B2RD01 187 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 LRRN3E7EW58 273 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 J3QL48 77 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 MPZL2O60487 215 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 CRHBPP24387 322 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 CRYBB2P43320 205 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 MAGEB1P43366 347 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 DAP3P51398 398 aaKnown RBP10.58□□□□□ -0.72
MRPL55-209ENST00000366735 GABARAPL2P60520 117 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 CDC42P60953 191 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 LMO4P61968 165 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 CCL8P80075 99 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 CDK5Q00535 292 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 IL5RAQ01344 420 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 HSF2Q03933 536 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 MELKQ14680 651 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 ZNF74Q16587 644 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 ALKBH6Q3KRA9 238 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 DCAF12L2Q5VW00 463 aa10.58□□□□□ -0.72
MRPL55-209ENST00000366735 C12orf73Q69YU5 71 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms