RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 F13BP05160 661 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L2P0CJ85 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L3P0CJ86 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L4P0CJ87 422 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L5P0CJ88 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L6P0CJ89 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L7P0CJ90 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 H2AFXP16104 143 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 RAB6AP20340 208 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ANXA11P50995 505 aaKnown RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZNF84P51523 738 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 UGT2B15P54855 530 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 MAB21L1Q13394 359 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 MPPED2Q15777 294 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 NPTX1Q15818 432 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 LY6EQ16553 131 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZNF181Q2M3W8 571 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 CEP85LQ5SZL2 805 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ARMC4Q5T2S8 1044 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 FAM27BQ5VT28 67 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 METTL11BQ5VVY1 283 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 OTPQ5XKR4 325 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 NXNQ6DKJ4 435 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 SFRP4Q6FHJ7 346 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR2T2Q6IF00 324 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 SLC25A47Q6Q0C1 308 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4L9Q6RFH8 374 aaPredicted RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 TRMT10CQ7L0Y3 403 aaKnown RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZER1Q7Z7L7 766 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 Q8N7P7 452 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZNF781Q8N8C0 355 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 RORBQ92753 470 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 HDAC2Q92769 488 aaKnown RBP6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 TPT1P8Q9HAU6 139 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 SERTAD4Q9NUC0 356 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 DUX4Q9UBX2 424 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 FAM96BQ9Y3D0 163 aa6.92□□□□□ -1.3
HMGB1P39-201ENST00000366304 A0A1B0GWJ7 208 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 H3BUX3 64 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 IFNL4K9M1U5 179 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 HDAC3O15379 428 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 FAM20BO75063 409 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 FBXO24O75426 580 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR6A2O95222 327 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 KRT75O95678 551 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ABHD16AO95870 558 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 MT-ATP6P00846 226 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 HLA-DPB1P04440 258 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 LIPFP07098 398 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 FBP1P09467 338 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ASAH2BP0C7U1 165 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ACADSP16219 412 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 GSTM3P21266 225 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 PRKAR1BP31321 381 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ARHGDIAP52565 204 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 CLNS1AP54105 237 aaKnown RBP6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 RAD23AP54725 363 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 EGFEM1PQ0D2K5 195 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 DPY19L1Q2PZI1 675 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 PRAMEF6Q5VXH4 476 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 DHRS4L2Q6PKH6 230 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ARL9Q6T311 187 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 BTN2A1Q7KYR7 527 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 PTOV1Q86YD1 416 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 NUDCD3Q8IVD9 361 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 TRIML2Q8N7C3 387 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 MOSPD2Q8NHP6 518 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 TNFRSF14Q92956 283 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 WDR89Q96FK6 387 aaPredicted RBP6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZNF702PQ9H963 129 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 MEAF6Q9HAF1 191 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ELOVL3Q9HB03 270 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 SIRT7Q9NRC8 400 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 TBCCD1Q9NVR7 557 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ZNF446Q9NWS9 450 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 ETAA1Q9NY74 926 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 KIF17Q9P2E2 1029 aa6.91□□□□□ -1.3
HMGB1P39-201ENST00000366304 A0A1W2PRX2 142 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 M0R3H8 397 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 KPNA4O00629 521 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 RFXANKO14593 260 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 NPFFO15130 113 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 CST2P09228 141 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 HOXB9P17482 250 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 SAA4P35542 130 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 SERPINB5P36952 375 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 EMX1Q04741 257 aaPredicted RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 RPL18Q07020 188 aaKnown RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 PDCD4Q53EL6 469 aaKnown RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 HSP90B2PQ58FF3 399 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 C1orf94Q6P1W5 598 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 FOXL2NBQ6ZUU3 175 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 IGFN1Q86VF2 1251 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 RBM45Q8IUH3 476 aaKnown RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 PNLDC1Q8NA58 520 aaKnown RBP6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 NPEPL1Q8NDH3 523 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR8G5Q8NG78 346 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR4F17Q8NGA8 305 aa6.9□□□□□ -1.3
HMGB1P39-201ENST00000366304 OR4D11Q8NGI4 311 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms