RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ASB5Q8WWX0 329 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 ELOVL3Q9HB03 270 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 PNRC2Q9NPJ4 139 aaKnown RBP18.02■□□□□ 0.48
SHISA4-201ENST00000362011 TRIM36Q9NQ86 728 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 BABAM2Q9NXR7 383 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 PLEK2Q9NYT0 353 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 ZNF224Q9NZL3 707 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 JKAMPQ9P055 326 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 LRP12Q9Y561 859 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 HCFC1P51610 2035 aa18.02■□□□□ 0.48
SHISA4-201ENST00000362011 APCP25054 2843 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 DOK2O60496 412 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ABHD16AO95870 558 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 CD79AP11912 226 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 HOXC12P31275 282 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ARR3P36575 388 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 OPRL1P41146 370 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 TAS2R43P59537 309 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 UBE2NP61088 152 aaKnown RBP18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ADORA2A-AS1P86434 159 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 BDH1Q02338 343 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 MRPL28Q13084 256 aaKnown RBP18.01■□□□□ 0.47
SHISA4-201ENST00000362011 RAB39AQ14964 217 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 TSC22D1Q15714 1073 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 C17orf78Q8N4C9 275 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 HAVCR2Q8TDQ0 301 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 MARVELD3Q96A59 401 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 PELI1Q96FA3 418 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ATF6BQ99941 703 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 OR2H1Q9GZK4 316 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 HDHD2Q9H0R4 259 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ACOXLQ9NUZ1 547 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ELOVL5Q9NYP7 299 aa18.01■□□□□ 0.47
SHISA4-201ENST00000362011 ARPC4-TTLL3A0A0A6YYG9 625 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 LALBAP00709 142 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 HLA-HP01893 362 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 PSMB1P20618 241 aaKnown RBP18■□□□□ 0.47
SHISA4-201ENST00000362011 IL32P24001 234 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 GRB2P62993 217 aaKnown RBP18■□□□□ 0.47
SHISA4-201ENST00000362011 PSG4Q00888 419 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 DOC2BQ14184 412 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 SLC25A35Q3KQZ1 300 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 ARMCX4Q5H9R4 360 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 LIPNQ5VXI9 398 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 GPR141Q7Z602 305 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 CCDC120Q96HB5 630 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 OPALINQ96PE5 141 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 HDHD5Q9BXW7 423 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 WNT5BQ9H1J7 359 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 SLC17A5Q9NRA2 495 aa18■□□□□ 0.47
SHISA4-201ENST00000362011 DDX28Q9NUL7 540 aaKnown RBP18■□□□□ 0.47
SHISA4-201ENST00000362011 ANKRD17O75179 2603 aaKnown RBP18■□□□□ 0.47
SHISA4-201ENST00000362011 DIDO1Q9BTC0 2240 aaKnown RBP18■□□□□ 0.47
SHISA4-201ENST00000362011 RPP14O95059 124 aaKnown RBP17.99■□□□□ 0.47
SHISA4-201ENST00000362011 HSD11B1P28845 292 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 PSMB10P40306 273 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 TUBA1BP68363 451 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 TSTQ16762 297 aaKnown RBP17.99■□□□□ 0.47
SHISA4-201ENST00000362011 PABPC1L2AQ5JQF8 200 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 SP5Q6BEB4 398 aaPredicted RBP17.99■□□□□ 0.47
SHISA4-201ENST00000362011 ZNF774Q6NX45 483 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 STAC2Q6ZMT1 411 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 TUBA1AQ71U36 451 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 AKR7LQ8NHP1 331 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 TMIGD2Q96BF3 282 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 COQ7Q99807 217 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 NIPAL2Q9H841 368 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 AMDHD2Q9Y303 409 aa17.99■□□□□ 0.47
SHISA4-201ENST00000362011 HEATR1Q9H583 2144 aaKnown RBP17.99■□□□□ 0.47
SHISA4-201ENST00000362011 ZNF503-AS2A6NEH8 195 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 E9PI62 339 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 SYNGR3O43761 229 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ZG16O60844 167 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 CPEP16870 476 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 DCTDP32321 178 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 TTKP33981 857 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ASCL1P50553 236 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 RAB1AP62820 205 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ECH1Q13011 328 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 GSG1Q2KHT4 349 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ALDH16A1Q8IZ83 802 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 STEAP2Q8NFT2 490 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 OR13F1Q8NGS4 319 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 OR1F12Q8NHA8 337 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 UFD1Q92890 307 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 KCNJ15Q99712 375 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 OBP2BQ9NPH6 170 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 B3GNT2Q9NY97 397 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ATPIF1Q9UII2 106 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 FBXL3Q9UKT7 428 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 GRIP1Q9Y3R0 1128 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 HTR5AP47898 357 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 TGM4P49221 684 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 GTF2A1P52655 376 aaPredicted RBP17.98■□□□□ 0.47
SHISA4-201ENST00000362011 PLP2Q04941 152 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ZNF829Q3KNS6 432 aaPredicted RBP17.98■□□□□ 0.47
SHISA4-201ENST00000362011 CCDC58Q4VC31 144 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 ZNF544Q6NX49 715 aa17.98■□□□□ 0.47
SHISA4-201ENST00000362011 RPL22L1Q6P5R6 122 aaKnown RBP17.98■□□□□ 0.47
SHISA4-201ENST00000362011 SATL1Q86VE3 508 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms