RNA–Protein interactions for RNA: ENST00000360535.8

CLIP3-201, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP3, Length 3,370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-201ENST00000360535 SAV1Q9H4B6 383 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 IGLV1-36A0A0B4J1U3 117 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 TUBAL3A6NHL2 446 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 TOR1AO14656 332 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 HPP00738 406 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 MRPS21P82921 87 aaKnown RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 EBPQ15125 230 aaKnown RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 SGCBQ16585 318 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 AKIRIN2Q53H80 203 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 CATSPERDQ86XM0 798 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 OR6K3Q8NGY3 331 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 NPRL2Q8WTW4 380 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 ASB17Q8WXJ9 295 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 ADIPOR1Q96A54 375 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 C8orf44Q96CB5 159 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 BANF2Q9H503 90 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 TMEM231Q9H6L2 316 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 GPN3Q9UHW5 284 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 METTL21EPA6NDL7 271 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 DISC1C4P0D8 188 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 FADS1O60427 444 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 ERCC1P07992 297 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 CD96P40200 585 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 SLC6A8P48029 635 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 AKR1D1P51857 326 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 RAB12Q6IQ22 244 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 OR52H1Q8NGJ2 320 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 OR2I1PQ8NGU4 316 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 THAP6Q8TBB0 222 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 PAQR8Q8TEZ7 354 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 TMEM41AQ96HV5 264 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 ZNF578Q96N58 590 aaPredicted RBP10.86□□□□□ -0.67
CLIP3-201ENST00000360535 OR2S2Q9NQN1 319 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 SLC39A1Q9NY26 324 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 MBD2Q9UBB5 411 aa10.86□□□□□ -0.67
CLIP3-201ENST00000360535 FRG2CA6NGY1 282 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 STK17BO94768 372 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 RPA2P15927 270 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 MECP2P51608 486 aaKnown RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 BAMBIQ13145 260 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 SLC9A3R2Q15599 337 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OVCH2Q7RTZ1 564 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OR2W3Q7Z3T1 314 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 NAXDQ8IW45 347 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 TMEM229BQ8NBD8 167 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 INO80EQ8NBZ0 244 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OR10H5Q8NGA6 315 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 LIPHQ8WWY8 451 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 ROBO4Q8WZ75 1007 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 SOX7Q9BT81 388 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 MMP17Q9ULZ9 603 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 A0A0B4J2A0 478 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 A8MVM7 634 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 PLPP3O14495 311 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 POLR2HP52434 150 aaKnown RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 ELOCQ15369 112 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 AWAT2Q6E213 333 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 C11orf87Q6NUJ2 197 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 GALNTL5Q7Z4T8 443 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OR5D18Q8NGL1 313 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 MARCH1Q8TCQ1 289 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 SLC25A21Q9BQT8 299 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 NICN1Q9BSH3 213 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 SHPKQ9UHJ6 478 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 SYT7O43581 403 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 TPPPO94811 219 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 MGMTP16455 207 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 NAGAP17050 411 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 TLE3Q04726 772 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 ZNF169Q14929 603 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 TMPPEQ6ZT21 453 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 NUP54Q7Z3B4 507 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OR5M8Q8NGP6 311 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 OR1S2Q8NGQ3 325 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 MAFIPQ8WZ33 124 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 WWTR1Q9GZV5 400 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 WBP1LQ9NX94 342 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 CTSFQ9UBX1 484 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 GDF2Q9UK05 429 aaPredicted RBP10.85□□□□□ -0.67
CLIP3-201ENST00000360535 R4GMQ9 66 aa10.85□□□□□ -0.67
CLIP3-201ENST00000360535 CELSR3Q9NYQ7 3312 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 MPIG6BO95866 241 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 AGTR1P30556 359 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 CDAP32320 146 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 TEX30Q5JUR7 227 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 CLVS2Q5SYC1 327 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 KLHL24Q6TFL4 600 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 DNM1P46Q6ZS02 220 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 ANGPTL5Q86XS5 388 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 ZNF519Q8TB69 540 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 ADAT3Q96EY9 351 aaPredicted RBP10.84□□□□□ -0.67
CLIP3-201ENST00000360535 CPNE2Q96FN4 548 aaPredicted RBP10.84□□□□□ -0.67
CLIP3-201ENST00000360535 FAM71F1Q96KD3 344 aaPredicted RBP10.84□□□□□ -0.67
CLIP3-201ENST00000360535 SUSD2Q9UGT4 822 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 NUP210LQ5VU65 1888 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 A0A1W2PP11 408 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 A0A1W2PPC4 97 aa10.84□□□□□ -0.67
CLIP3-201ENST00000360535 OR14I1A6ND48 311 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms