RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 PRR32B1ATL7 298 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PPP1R17O96001 155 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC25A4P12235 298 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CRISP2P16562 243 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 MPLP40238 635 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 IQCJQ1A5X6 159 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CENPVQ7Z7K6 275 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 POM121L2Q96KW2 1035 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 NXF2Q9GZY0 626 aaKnown RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 ZDHHC11Q9H8X9 412 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 LTB4R2Q9NPC1 389 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 NRIP3Q9NQ35 241 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 CA10Q9NS85 328 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 ADAM29Q9UKF5 820 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 SLC22A13Q9Y226 551 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
BRCA1-203ENST00000357654 PTPRMP28827 1452 aa5.3□□□□□ -1.56
BRCA1-203ENST00000357654 A0A1W2PQL4 384 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 GFYI3L273 518 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TMPRSS2O15393 492 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ORM1P02763 201 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TMIGD3P0DMS9 266 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 B4GALT1P15291 398 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PPP1CAP62136 330 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 IL11RAQ14626 422 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 HLA-BQ31612 363 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 LGALSLQ3ZCW2 172 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CMPK2Q5EBM0 449 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ABI3BPQ7Z7G0 1075 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 RETREG3Q86VR2 466 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MFSD4AQ8N468 514 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR2G3Q8NGZ4 309 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 BTF3L4Q96K17 158 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 RHNO1Q9BSD3 238 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MEGF6O75095 1541 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CCDC187A0A096LP49 1063 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 C2CD4DB7Z1M9 353 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MITFO75030 526 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SNAP29O95721 258 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 B3GALT4O96024 378 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ZDHHC11BP0C7U3 371 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CD1DP15813 335 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ADRA2CP18825 462 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PMCHP20382 165 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 VDAC1P21796 283 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TPMTP51580 245 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SRSF5Q13243 272 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR2F1Q13607 317 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PDCD1Q15116 288 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 NSUN5P1Q3KNT7 163 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FNDC7Q5VTL7 733 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ACSM5Q6NUN0 579 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CHDHQ8NE62 594 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CD200R1Q8TD46 325 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF516Q92618 1163 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ERGIC1Q969X5 290 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 COQ10AQ96MF6 247 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ADAT1Q9BUB4 502 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FBXL2Q9UKC9 423 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 J3KTA2 159 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 M0R1X1 148 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SMAD6O43541 496 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FOXD2O60548 495 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 BRS3P32247 399 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF93P35789 620 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 DLX1P56177 255 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SH3BP2P78314 561 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ZNF273Q14593 569 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 HNRNPA1L2Q32P51 320 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 NKAIN1Q4KMZ8 207 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 KHDC1Q4VXA5 237 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 IRF2BP2Q7Z5L9 587 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PXT1Q8NFP0 134 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ASB17Q8WXJ9 295 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 FLYWCH2Q96CP2 140 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ASB9Q96DX5 294 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PERPQ96FX8 193 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SLC46A2Q9BY10 475 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 POFUT1Q9H488 388 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 PRSS50Q9UI38 385 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 AJAP1Q9UKB5 411 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SNX11Q9Y5W9 270 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 SLC22A7Q9Y694 548 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 GAPDHSO14556 408 aaPredicted RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 NME2P1O60361 137 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 DUS4LO95620 317 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 MT-CO3P00414 261 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 ID1P41134 155 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 EIF1P41567 113 aaKnown RBP5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TAS2R19P59542 299 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 KLRB1Q12918 225 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 C3AR1Q16581 482 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 METTL11BQ5VVY1 283 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 COMMD1Q8N668 190 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TAAR6Q96RI8 345 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 CABLES2Q9BTV7 478 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 TRAV36DV7A0A075B6V5 113 aa5.29□□□□□ -1.56
BRCA1-203ENST00000357654 OR4C46A6NHA9 309 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms