RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 UNKLQ9H9P5 680 aaKnown RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 SDR39U1Q9NRG7 319 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ASIC5Q9NY37 505 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM82A0PJX8 343 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TMX2-CTNND1H3BSU7 103 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DBX2Q6ZNG2 339 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DOK3Q7L591 496 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 KTI12Q96EK9 354 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 MBOAT4Q96T53 435 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 C12orf10Q9HB07 376 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 PCDHGA9Q9Y5G4 932 aaKnown RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 IGHV3-35A0A0C4DH35 117 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ABLIM3O94929 683 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 NFYAP23511 347 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 CHATP28329 748 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 MAP2K6P52564 334 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 INPP5JQ15735 1006 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 TUSC1Q2TAM9 212 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF691Q5VV52 312 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 LAIR1Q6GTX8 287 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ADAM5Q6NVV9 412 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 DRAXINQ8NBI3 349 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 RELL2Q8NC24 303 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 GJC3Q8NFK1 279 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 ABHD11Q8NFV4 315 aa6.66□□□□□ -1.34
VPS13A-202ENST00000357409 GPR55Q9Y2T6 319 aaPredicted RBP6.66□□□□□ -1.34
VPS13A-202ENST00000357409 A0A1B0GTL3 188 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 NDUFB3O43676 98 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ADRA2CP18825 462 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 BAGE2Q86Y30 109 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM123Q8N131 208 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 OR1L4Q8NGR5 311 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 MED9Q9NWA0 146 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 IGHV1OR15-9A0A0B4J2B8 117 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 AIPO00170 330 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 GAPDHSO14556 408 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 EML2O95834 649 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF121P58317 390 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM267Q0VDI3 215 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 CYP4V2Q6ZWL3 525 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 OR4S1Q8NGB4 309 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 BAHD1Q8TBE0 780 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 RPUSD4Q96CM3 377 aaKnown RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 IKZF5Q9H5V7 419 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 CPNE5Q9HCH3 593 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 FAM53CQ9NYF3 392 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 HILPDAQ9Y5L2 63 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 FER1L4A9Z1Z3 1794 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF724A8MTY0 619 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 THBS1P07996 1170 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF260Q3ZCT1 412 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 METTL11BQ5VVY1 283 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 RBM12BQ8IXT5 1001 aaKnown RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 CHRNA9Q9UGM1 479 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ST8SIA5O15466 376 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 PENKP01210 267 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 SLC25A6P12236 298 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 SRMP19623 302 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ORM2P19652 201 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 IAH1Q2TAA2 248 aaPredicted RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 WDSUB1Q8N9V3 476 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 DTWD2Q8NBA8 298 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 SARAFQ96BY9 339 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 HSD17B10Q99714 261 aaKnown RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 FAAP24Q9BTP7 215 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 EGLN1Q9GZT9 426 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 MOV10Q9HCE1 1003 aaKnown RBP6.65□□□□□ -1.34
VPS13A-202ENST00000357409 WBP1LQ9NX94 342 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 ICAM5Q9UMF0 924 aa6.65□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM189-UBE2V1I3L0A0 370 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 M0R135 149 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SCO1O75880 301 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 HPRP00739 348 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 BSGP35613 385 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RBP2P50120 134 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 CD81P60033 236 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ACTBP60709 375 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RAP2BP61225 183 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ACTG1P63261 375 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 TMEM52BQ4KMG9 183 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 PRSS48Q7RTY5 328 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ANKRD53Q8N9V6 530 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF799Q96GE5 643 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RHNO1Q9BSD3 238 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 HS3ST3A1Q9Y663 406 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 MEGF11A6BM72 1044 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 GPR171O14626 319 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 GPRIN2O60269 458 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 H3F3CQ6NXT2 135 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RAB39BQ96DA2 213 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 ZNF75AQ96N20 296 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 FBXL4Q9UKA2 621 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 HS3ST2Q9Y278 367 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 TRABD2BA6NFA1 517 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 C1orf196B1AJZ1 125 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 CST7O76096 145 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 SLC25A4P12235 298 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 RFX2P48378 723 aa6.65□□□□□ -1.35
VPS13A-202ENST00000357409 DRAM2Q6UX65 266 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms