RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 OR6C76A6NM76 312 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TPPPO94811 219 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 AKR7A3O95154 331 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 SPDEFO95238 335 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 IGF2P01344 180 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 RLN2P04090 185 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 CD3DP04234 171 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 CSF1P09603 554 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 FTH1P19P0C7X4 201 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 GTF2F2P13984 249 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 POU3F4P49335 361 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 EGR4Q05215 589 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ELOA3BQ3SY89 546 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OTPQ5XKR4 325 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 FAM122CQ6P4D5 195 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 C6orf15Q6UXA7 325 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-204ENST00000353317 CFAP77Q6ZQR2 320 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ASCL5Q7RTU5 278 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 PPP1R32Q7Z5V6 425 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 IQCF2Q8IXL9 164 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF454Q8N9F8 522 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ELOA3Q8NG57 546 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OR52H1Q8NGJ2 320 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OR6N2Q8NGY6 317 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 OR8S1Q8NH09 359 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF417Q8TAU3 575 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 MCHR2Q969V1 340 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 AMELYQ99218 206 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 AIFM2Q9BRQ8 373 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 SLC19A3Q9BZV2 496 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 STRADBQ9C0K7 418 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 LDAHQ9H6V9 325 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TMEM138Q9NPI0 162 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TAS2R8Q9NYW2 309 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 MYOTQ9UBF9 498 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 GPN3Q9UHW5 284 aaPredicted RBP7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TCFL5Q9UL49 500 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 PCDHGA1Q9Y5H4 931 aa7.69□□□□□ -1.18
TRIM55-204ENST00000353317 TRAV18A0A075B6X5 111 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TOR1AO14656 332 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TERTO14746 1132 aaKnown RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ASAH2BP0C7U1 165 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ALOX5APP20292 161 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 MPGP29372 298 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 PNLIPRP2P54317 469 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 SCAND1P57086 179 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 DCAF7P61962 342 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 SORDQ00796 357 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 C4orf46Q504U0 113 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 MESTQ5EB52 335 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 C11orf88Q6PI97 169 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 LRRC69Q6ZNQ3 347 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 CDH26Q8IXH8 852 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 PDZD9Q8IXQ8 264 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 GPR148Q8TDV2 347 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 MFFQ9GZY8 342 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 MMP25Q9NPA2 562 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 CCDC187A0A096LP49 1063 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 LOC101059948A0A1B0GTJ6 334 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TMEM212A6NML5 194 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ALG1L2C9J202 215 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 SCDO00767 359 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TM4SF5O14894 197 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF264O43296 627 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 URB1O60287 2271 aaKnown RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TNFSF15O95150 251 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 AKAIN1P0CW23 69 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ICAM2P13598 275 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 APEHP13798 732 aaKnown RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 IL12BP29460 328 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 PTGDSP41222 190 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 CCR4P51679 360 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 GMFBP60983 142 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 RPL18Q07020 188 aaKnown RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ZMYND11Q15326 602 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TGIF1Q15583 401 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 C2orf76Q3KRA6 126 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ASPHD2Q6ICH7 369 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ATRAIDQ6UW56 229 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 HSD17B13Q7Z5P4 300 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ATG4DQ86TL0 474 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ESX1Q8N693 406 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 CLEC1AQ8NC01 280 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 RELL2Q8NC24 303 aaPredicted RBP7.68□□□□□ -1.18
TRIM55-204ENST00000353317 OR10G3Q8NGC4 313 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 OR6K3Q8NGY3 331 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 NUBPLQ8TB37 319 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 DUSP19Q8WTR2 217 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 LIPHQ8WWY8 451 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 FBXW5Q969U6 566 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 TSPAN32Q96QS1 320 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 DDA1Q9BW61 102 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 COMMD4Q9H0A8 199 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF700Q9H0M5 742 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 SYT4Q9H2B2 425 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 ZNF160Q9HCG1 818 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 GRHPRQ9UBQ7 328 aa7.68□□□□□ -1.18
TRIM55-204ENST00000353317 C9J4A7 227 aa7.67□□□□□ -1.18
TRIM55-204ENST00000353317 RAD1O60671 282 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms