RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 RPA2P15927 270 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 ZNF93P35789 620 aaPredicted RBP11.9□□□□□ -0.5
CASC4-202ENST00000345795 ZNF121P58317 390 aaPredicted RBP11.9□□□□□ -0.5
CASC4-202ENST00000345795 OPN5Q6U736 354 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 GLIPR1L1Q6UWM5 242 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 TRAPPC6BQ86SZ2 158 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 APCDD1LQ8NCL9 501 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 OR52N5Q8NH56 324 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 PPP1R14BQ96C90 147 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 RDH8Q9NYR8 311 aa11.9□□□□□ -0.5
CASC4-202ENST00000345795 ARPC3O15145 178 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 CARD18P57730 90 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 SPIN3Q5JUX0 258 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 SFRP5Q5T4F7 317 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 PNLDC1Q8NA58 520 aaKnown RBP11.9□□□□□ -0.51
CASC4-202ENST00000345795 ST6GAL2Q96JF0 529 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 HRASLSQ9HDD0 168 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 ABRACLQ9P1F3 81 aa11.9□□□□□ -0.51
CASC4-202ENST00000345795 GDF2Q9UK05 429 aaPredicted RBP11.9□□□□□ -0.51
CASC4-202ENST00000345795 D6RAR5 112 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 TNFRSF10AO00220 468 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ZNF35P13682 527 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 RPS4Y1P22090 263 aaKnown RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 FAPQ12884 760 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ADAMTS14Q8WXS8 1223 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 C4orf45Q96LM5 186 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 PAPOLGQ9BWT3 736 aaKnown RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 MOKQ9UQ07 419 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 CAMK2AQ9UQM7 478 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 A0A0B4J293 547 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ACOT7O00154 380 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ADRA2CP18825 462 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 AMY2BP19961 511 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 CX3CR1P49238 355 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 RGS19P49795 217 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 AAED1Q7RTV5 226 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ZNF471Q9BX82 626 aaPredicted RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 OR2B2Q9GZK3 357 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 MOV10Q9HCE1 1003 aaKnown RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 CLDN16Q9Y5I7 305 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 PTPRSQ13332 1948 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 BLACEA4D250 179 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 PYCARD-AS1I3L0S3 204 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 TNFSF15O95150 251 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 HLA-AP01891 365 aaKnown RBP11.89□□□□□ -0.51
CASC4-202ENST00000345795 IGKV3-11P04433 115 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 HOXB5P09067 269 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 RAB3AP20336 220 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 PER3P56645 1201 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ST3GAL2Q16842 350 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 ELP2Q6IA86 826 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 P4HA3Q7Z4N8 544 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 LRRTM1Q86UE6 522 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 JAM3Q9BX67 310 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 PPP1R3EQ9H7J1 279 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 P4HTMQ9NXG6 502 aa11.89□□□□□ -0.51
CASC4-202ENST00000345795 MN1Q10571 1320 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 TEX13DA0A0J9YY54 714 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 OR2M5A3KFT3 312 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ZNF814B7Z6K7 855 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 LYPD3O95274 346 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 CASRP41180 1078 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ARG2P78540 354 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 CDONQ4KMG0 1287 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 LINC01590Q5TEZ4 76 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ZNF100Q8IYN0 542 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 PRSS35Q8N3Z0 413 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ZNF611Q8N823 705 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 SAP25Q8TEE9 199 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 RGP1Q92546 391 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 MRPL22Q9NWU5 206 aaKnown RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 COL4A4P53420 1690 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ZNF16P17020 682 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 CCR9P51686 369 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 CSNK2A1P68400 391 aaPredicted RBP11.88□□□□□ -0.51
CASC4-202ENST00000345795 TAF9Q16594 264 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 TMEM255AQ5JRV8 349 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 RABEPKQ7Z6M1 372 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 OR5AS1Q8N127 324 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 CSNK2A3Q8NEV1 391 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ABHD3Q8WU67 409 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 STEAP1Q9UHE8 339 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 PCDHGA5Q9Y5G8 931 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 K7ESF4 209 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ASAH2BP0C7U1 165 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 CYB561P49447 251 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ZNF84P51523 738 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 ARPC4P59998 168 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 Q5BKY6 102 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 PMS2CLQ68D20 193 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 SLC16A14Q7RTX9 510 aa11.88□□□□□ -0.51
CASC4-202ENST00000345795 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms