RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 SGCEO43556 437 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 ZFPL1O95159 310 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 GALP22466 123 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 TGFBR1P36897 503 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 KIR3DL2P43630 455 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 MMP16P51512 607 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 GRB2P62993 217 aaKnown RBP14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 PSG4Q00888 419 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 SPCS2Q15005 226 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC36A2Q495M3 483 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 WDR38Q5JTN6 314 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 TMEM91Q6ZNR0 172 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 CATSPERDQ86XM0 798 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 GABRG1Q8N1C3 465 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 IL17RDQ8NFM7 739 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 DCLRE1CQ96SD1 692 aaKnown RBP14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 COQ7Q99807 217 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 ATF6BQ99941 703 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 HDHD5Q9BXW7 423 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 OR2H1Q9GZK4 316 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 HDHD2Q9H0R4 259 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 OPN3Q9H1Y3 402 aaPredicted RBP14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 RNF167Q9H6Y7 350 aa14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 TXNL4BQ9NX01 149 aaKnown RBP14.29□□□□□ -0.12
CEACAM1-202ENST00000344391 TMEM269A0A1B0GVZ9 245 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 GABRPO00591 440 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 SYNGR3O43761 229 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 SC5DO75845 299 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 COX5AP20674 150 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 HSD11B1P28845 292 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 FGF9P31371 208 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 PRKXP51817 358 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 RPS11P62280 158 aaKnown RBP eCLIP14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 TGFBR3Q03167 851 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 NFATC3Q12968 1075 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 RSPO1Q2MKA7 263 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF829Q3KNS6 432 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF774Q6NX45 483 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF544Q6NX49 715 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF433Q8N7K0 673 aaPredicted RBP14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 OR5AK2Q8NH90 309 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ABHD4Q8TB40 342 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 PPP1R14AQ96A00 147 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 KCNJ15Q99712 375 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 WNT5BQ9H1J7 359 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 G6PC2Q9NQR9 355 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 FAM206AQ9NX38 181 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 SH3BGRL2Q9UJC5 107 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF281Q9Y2X9 895 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 COL6A6A6NMZ7 2263 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 KALRNO60229 2985 aa14.28□□□□□ -0.12
CEACAM1-202ENST00000344391 A0A0G2JNJ9 132 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 A0A1W2PPW3 197 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 ZNF503-AS2A6NEH8 195 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 OR6C6A6NF89 314 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 LOC110117498-PIK3R3F6TDL0 507 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 DOK2O60496 412 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 RGS9O75916 674 aaPredicted RBP14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 HLA-HP01893 362 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 PCSK6P29122 969 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 OTX1P32242 354 aaPredicted RBP14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 PSMA6P60900 246 aaKnown RBP14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 CACNA1BQ00975 2339 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 ECH1Q13011 328 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 INSL4Q14641 139 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 GABRA6Q16445 453 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 ST3GAL2Q16842 350 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 TBRG1Q3YBR2 411 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 HIKESHIQ53FT3 197 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 BEND4Q6ZU67 534 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 OR13C5Q8NGS8 318 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 OR1F12Q8NHA8 337 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 AKR7LQ8NHP1 331 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 NDNFQ8TB73 568 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 RGP1Q92546 391 aaPredicted RBP14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 BOD1Q96IK1 185 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 Q9UFV3 132 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 OR52A1Q9UKL2 312 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 SLC22A13Q9Y226 551 aa14.27□□□□□ -0.12
CEACAM1-202ENST00000344391 TMEM212A6NML5 194 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 E9PLN8 166 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 LYZL6O75951 148 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 SERPINA3P01011 423 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 CRYGSP22914 178 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 OPRM1P35372 400 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 GALK2Q01415 458 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 YIF1BQ5BJH7 314 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 PABPC1L2AQ5JQF8 200 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 C22orf42Q6IC83 251 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 DPPA2Q7Z7J5 298 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 DMRTA2Q96SC8 542 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 VKORC1Q9BQB6 163 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 RNF121Q9H920 327 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 GTF2A1LQ9UNN4 478 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 NBASA2RRP1 2371 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 DVL2O14641 736 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 RAD51DO75771 328 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 UBL3O95164 117 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 UGT2B10P36537 528 aa14.26□□□□□ -0.13
CEACAM1-202ENST00000344391 ARR3P36575 388 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms