RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 SLC22A10Q63ZE4 541 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 NUP43Q8NFH3 380 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR2G2Q8NGZ5 317 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 OR5R1Q8NH85 324 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 BBS10Q8TAM1 723 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SLC25A28Q96A46 364 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 C3orf49Q96BT1 292 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 ALG8Q9BVK2 526 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CDC42EP3Q9UKI2 254 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 SLC35A3Q9Y2D2 325 aa6.51□□□□□ -1.37
ZNF540-202ENST00000343599 CHD3Q12873 2000 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 A0A096LNT2 108 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 RPL36A-HNRNPH2H7BZ11 118 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CASKO14936 926 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SPDEFO95238 335 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PRPH2P23942 346 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 S100A2P29034 98 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 GDNFP39905 211 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 LIMS1P48059 325 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SRP9P49458 86 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PRKXP51817 358 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CAV3P56539 151 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 LCP2Q13094 533 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PTGR1Q14914 329 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PRR30Q53SZ7 412 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 TMEM201Q5SNT2 666 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 C6orf136Q5SQH8 315 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 ACSM5Q6NUN0 579 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PAPD4Q6PIY7 484 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CLEC9AQ6UXN8 241 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SSX6Q7RTT6 188 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CDK20Q8IZL9 346 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PTCHD1Q96NR3 888 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CPPED1Q9BRF8 314 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 IFT27Q9BW83 186 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 JAM3Q9BX67 310 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 PTGES2Q9H7Z7 377 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 NGBQ9NPG2 151 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 TMEM138Q9NPI0 162 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 GAR1Q9NY12 217 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SLC22A14Q9Y267 594 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 GSTK1Q9Y2Q3 226 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 URB1O60287 2271 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 EEF1E1O43324 174 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 DIRAS3O95661 229 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CGAP01215 116 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SNRNP70P08621 437 aaKnown RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SHC1P29353 583 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CD200P41217 278 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SLC1A2P43004 574 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CDC42P60953 191 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 DYRK1AQ13627 763 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 TPBGQ13641 420 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SLC10A1Q14973 349 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 NCMAPQ5T1S8 102 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SLC25A24Q6NUK1 477 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 CDC73Q6P1J9 531 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 TRAT1Q6PIZ9 186 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 ZNF813Q6ZN06 617 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 OR10Q1Q8NGQ4 319 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 FEVQ99581 238 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 MAPKAP1Q9BPZ7 522 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 SUCNR1Q9BXA5 334 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 GSX1Q9H4S2 264 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 BRF2Q9HAW0 419 aa6.5□□□□□ -1.37
ZNF540-202ENST00000343599 FAM212BQ9NTI7 297 aaPredicted RBP6.5□□□□□ -1.37
ZNF540-202ENST00000343599 TRDV1A0A1B0GX56 115 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 SLC22A31A6NKX4 558 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 FAAHO00519 579 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 OR1I1O60431 355 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 DIRAS1O95057 198 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 AIFM1O95831 613 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 SNRPCP09234 159 aaKnown RBP6.49□□□□□ -1.37
ZNF540-202ENST00000343599 NPSP0C0P6 89 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 PRPS2P11908 318 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 TACR3P29371 465 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 BDKRB2P30411 391 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 GABRA5P31644 462 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 CDKN1BP46527 198 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 CLDN8P56748 225 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 SNRPGP62308 76 aaKnown RBP6.49□□□□□ -1.37
ZNF540-202ENST00000343599 RPS25P62851 125 aaKnown RBP6.49□□□□□ -1.37
ZNF540-202ENST00000343599 RSU1Q15404 277 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 CTSL3PQ5NE16 218 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 LPCAT3Q6P1A2 487 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 FAM151BQ6UXP7 276 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 GLDNQ6ZMI3 551 aaPredicted RBP6.49□□□□□ -1.37
ZNF540-202ENST00000343599 OAFQ86UD1 273 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 CILP2Q8IUL8 1156 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 VRK3Q8IV63 474 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 TOMM5Q8N4H5 51 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 RFLNBQ8N5W9 214 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 UBAC2Q8NBM4 344 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 OR5AR1Q8NGP9 310 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 OR1S2Q8NGQ3 325 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 RHEBL1Q8TAI7 183 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 STOML3Q8TAV4 291 aa6.49□□□□□ -1.37
ZNF540-202ENST00000343599 ASB13Q8WXK3 278 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms