RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 HSPA13P48723 471 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 STARP49675 285 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 MLLT10P55197 1068 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR2B6P58173 313 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ACSM1Q08AH1 577 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 FOXF2Q12947 444 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PMS2P3Q13401 168 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ENDOGQ14249 297 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR7A5Q15622 319 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 HFEQ30201 348 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PDLIM3Q53GG5 364 aaPredicted RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ALG10Q5BKT4 473 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NCMAPQ5T1S8 102 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 STAC2Q6ZMT1 411 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF730Q6ZMV8 503 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SLC35D2Q76EJ3 337 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NANOGNBQ7Z5D8 188 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 DTX2Q86UW9 622 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PHC2Q8IXK0 858 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CDK20Q8IZL9 346 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 FAM185AQ8N0U4 392 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 RPRMLQ8N4K4 120 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SLC26A10Q8NG04 563 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 FNDC9Q8TBE3 224 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 FANK1Q8TC84 345 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 APH1AQ96BI3 265 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 RNFT2Q96EX2 444 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 TPD52L3Q96J77 140 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF649Q9BS31 505 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR52D1Q9H346 318 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 INPP5EQ9NRR6 644 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ING3Q9NXR8 418 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 GLTPQ9NZD2 209 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 DNAJB11Q9UBS4 358 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SH3GLB1Q9Y371 365 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CFAP47Q6ZTR5 3102 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 MED12LQ86YW9 2145 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 URB1O60287 2271 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 KNL1Q8NG31 2342 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PRRC2AP48634 2157 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 DEFB108AA8MXU0 73 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NPIPA2E9PIF3 369 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NPIPA3F8WFD2 350 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 G3V2T6 193 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 hCG_2039718K7EN88 272 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ARHGEF9O43307 516 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PPP1R3DO95685 299 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 F10P00742 488 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF35P13682 527 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CFPP27918 469 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CRISP1P54107 249 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 MFAP4P55083 255 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CSNK2BP67870 215 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 HOXC5Q00444 222 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 HSF2Q03933 536 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SCN1BQ07699 218 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ACKR1Q16570 336 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 TBRG1Q3YBR2 411 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SLC36A3Q495N2 470 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PHYHD1Q5SRE7 291 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF691Q5VV52 312 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 MEDAGQ5VYS4 303 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NXNL2Q5VZ03 156 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR5M10Q6IEU7 315 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 C11orf71Q6IPW1 123 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 DNM1P34Q6PK57 102 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 CADM2Q8N3J6 435 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 AQP11Q8NBQ7 271 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR2T33Q8NG76 320 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 OR13C2Q8NGS9 318 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 VANGL1Q8TAA9 524 aaPredicted RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 TMEM163Q8TC26 289 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ABHD3Q8WU67 409 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF385AQ96PM9 386 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 NIPSNAP1Q9BPW8 284 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 PRRG3Q9BZD7 231 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SIAEQ9HAT2 523 aa3.03□□□□□ -1.92
CCDC66-202ENST00000341455 FGF20Q9NP95 211 aaPredicted RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF701Q9NV72 531 aaPredicted RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 WARS2Q9UGM6 360 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 ZNF346Q9UL40 294 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 SAMHD1Q9Y3Z3 626 aaKnown RBP3.03□□□□□ -1.92
CCDC66-202ENST00000341455 DNAH3Q8TD57 4116 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 DHRS7CA6NNS2 312 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 NOTOA8MTQ0 251 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 H0YC42 278 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 OVOL3O00110 214 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 PHYHO14832 338 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 DENRO43583 198 aaKnown RBP3.02□□□□□ -1.93
CCDC66-202ENST00000341455 RGS10O43665 173 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 AKR7A3O95154 331 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 CH25HO95992 272 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 CD55P08174 381 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 CCL1P22362 96 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 ARR3P36575 388 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 RFC3P40938 356 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 MRPS11P82912 194 aaKnown RBP3.02□□□□□ -1.93
CCDC66-202ENST00000341455 SLC34A1Q06495 639 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 PMPCAQ10713 525 aa3.02□□□□□ -1.93
CCDC66-202ENST00000341455 AQP6Q13520 282 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms