RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 GYPBP06028 91 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 GALP22466 123 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 FBXW4P57775 412 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 KLF9Q13886 244 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 MEPCEQ7L2J0 689 aaKnown RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 LINGO2Q7L985 606 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 CYB561A3Q8NBI2 242 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 RNASE11Q8TAA1 199 aaKnown RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 GHSRQ92847 366 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 SLC41A3Q96GZ6 507 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 DNAJB12Q9NXW2 375 aaKnown RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 RASL12Q9NYN1 266 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 LOC390937A0A1W2PQ73 354 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 BTBD17A6NE02 478 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 NPIPB9F8W1W9 429 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 SYT5O00445 386 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 CSTAP01040 98 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 MT-ND5P03915 603 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 OR8U8P0C7N1 319 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 PTHLHP12272 177 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 HCCSP53701 268 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 OR1Q1Q15612 314 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 RFLNBQ8N5W9 214 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 ZNF671Q8TAW3 534 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 TAAR9Q96RI9 348 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 ZNF471Q9BX82 626 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 WDR13Q9H1Z4 485 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 OR52D1Q9H346 318 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 CCDC86Q9H6F5 360 aaKnown RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 MEPEQ9NQ76 525 aaPredicted RBP13.54□□□□□ -0.24
BRAT1-201ENST00000340611 PCSK5Q92824 1860 aa13.54□□□□□ -0.24
BRAT1-201ENST00000340611 AK1P00568 194 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 THBS1P07996 1170 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 IL12BP29460 328 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 NBL1P41271 181 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 SLC26A5P58743 744 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 BDH1Q02338 343 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 KRBOX4Q5JUW0 171 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 KIRREL2Q6UWL6 708 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 OR2W3Q7Z3T1 314 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-201ENST00000340611 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 G6PC3Q9BUM1 346 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 MED17Q9NVC6 651 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 FAM96BQ9Y3D0 163 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 CBY1Q9Y3M2 126 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 FRG2CA6NGY1 282 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 POMZP3Q6PJE2 187 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 TMEM205Q6UW68 189 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 C6orf15Q6UXA7 325 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-201ENST00000340611 PFN4Q8NHR9 129 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 LGALS14Q8TCE9 139 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ATG101Q9BSB4 218 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 TMEM138Q9NPI0 162 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 OPN4Q9UHM6 478 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ANKRD61A6NGH8 418 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 SERINC4A6NH21 518 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 OR2J2O76002 312 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 YIF1AO95070 293 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ACTL6AO96019 429 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ACAA2P42765 397 aaKnown RBP13.53□□□□□ -0.24
BRAT1-201ENST00000340611 BIKQ13323 160 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 PCOLCEQ15113 449 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 LRRC37A5PQ49AS3 106 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 HACD4Q5VWC8 232 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 MBOAT2Q6ZWT7 520 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 TPRA1Q86W33 373 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 PAQR8Q8TEZ7 354 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 KISS1RQ969F8 398 aaPredicted RBP13.53□□□□□ -0.24
BRAT1-201ENST00000340611 DERL3Q96Q80 235 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 PIGMQ9H3S5 423 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 ZNF160Q9HCG1 818 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 C20orf141Q9NUB4 165 aa13.53□□□□□ -0.24
BRAT1-201ENST00000340611 CCDC187A0A096LP49 1063 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 KLF4O43474 513 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PLPP2O43688 288 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 IL33O95760 270 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 FXYD6P3P58550 94 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 BPIFB3P59826 476 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PITPNAQ00169 270 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PLEKHN1Q494U1 663 aaPredicted RBP13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PYY3Q5JQD4 70 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 SLC22A10Q63ZE4 541 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PGAP1Q75T13 922 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 GID4Q8IVV7 300 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 ARMC10Q8N2F6 343 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 OR2Y1Q8NGV0 311 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 ISOC2Q96AB3 205 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 LIN37Q96GY3 246 aaPredicted RBP13.52□□□□□ -0.24
BRAT1-201ENST00000340611 PGLYRP3Q96LB9 341 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 HRASLSQ9HDD0 168 aa13.52□□□□□ -0.24
BRAT1-201ENST00000340611 ONECUT2O95948 504 aa13.52□□□□□ -0.25
BRAT1-201ENST00000340611 RLN1P04808 185 aa13.52□□□□□ -0.25
BRAT1-201ENST00000340611 IFI6P09912 130 aa13.52□□□□□ -0.25
BRAT1-201ENST00000340611 EPXP11678 715 aa13.52□□□□□ -0.25
BRAT1-201ENST00000340611 MPGP29372 298 aa13.52□□□□□ -0.25
BRAT1-201ENST00000340611 CCR9P51686 369 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms