RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NKPD1Q17RQ9 610 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ZNF718Q3SXZ3 478 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ELFN2Q5R3F8 820 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 LINC01590Q5TEZ4 76 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ACSM5Q6NUN0 579 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 FAHD1Q6P587 224 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 C1orf174Q8IYL3 243 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 PROKR2Q8NFJ6 384 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 OR51L1Q8NGJ5 315 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 GTF3AQ92664 365 aaKnown RBP13.14□□□□□ -0.31
VAPA-201ENST00000340541 MAP6Q96JE9 813 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 COQ7Q99807 217 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 HCAR1Q9BXC0 346 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 ELOVL3Q9HB03 270 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 SLCO1C1Q9NYB5 712 aa13.14□□□□□ -0.31
VAPA-201ENST00000340541 TVP23AA6NH52 213 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 RIIAD1A6NNX1 92 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 C17orf100A8MU93 164 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 H3BSA7 217 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 HPXP02790 462 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
VAPA-201ENST00000340541 SPI1P17947 270 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 USF1P22415 310 aaPredicted RBP13.13□□□□□ -0.31
VAPA-201ENST00000340541 GIFP27352 417 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 RPS27P42677 84 aaKnown RBP13.13□□□□□ -0.31
VAPA-201ENST00000340541 NR4A2P43354 598 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 MMP15P51511 669 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 SELENOVP59797 346 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 CDK5Q00535 292 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 GINS1Q14691 196 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 SLC27A4Q6P1M0 643 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 ARL9Q6T311 187 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 UNQ6126/PRO20091Q6UXV3 157 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 PHC2Q8IXK0 858 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 OR10S1Q8NGN2 331 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 UBASH3BQ8TF42 649 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 BEX2Q9BXY8 128 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 WDR76Q9H967 626 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 HINT3Q9NQE9 182 aaKnown RBP13.13□□□□□ -0.31
VAPA-201ENST00000340541 KCNG2Q9UJ96 466 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 STARD10Q9Y365 291 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 GRIP1Q9Y3R0 1128 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 AP4S1Q9Y587 144 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
VAPA-201ENST00000340541 ANK3Q12955 4377 aaKnown RBP13.13□□□□□ -0.31
VAPA-201ENST00000340541 FAM183AA6NL82 134 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 LYNX1G3V0Z9 82 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 IFNGP01579 166 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 LYNX1P0DP58 116 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 ZNF3P17036 446 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 POU1F1P28069 291 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 GCH1P30793 250 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 MAGEB1P43366 347 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 GZMKP49863 264 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 DAPP51397 102 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 ARHGDIAP52565 204 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 PCK2Q16822 640 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 CCDC121Q6ZUS5 278 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 OR5K1Q8NHB7 308 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 PTP4A1Q93096 173 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 DCLRE1CQ96SD1 692 aaKnown RBP13.12□□□□□ -0.31
VAPA-201ENST00000340541 PIMREGQ9BSJ6 248 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 MED20Q9H944 212 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 ZNF556Q9HAH1 456 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
VAPA-201ENST00000340541 IGHV4-61A0A0C4DH41 118 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 ZSCAN5BA6NJL1 495 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 SURF4O15260 269 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 CIB2O75838 187 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 TUBG1P23258 451 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 FASP25445 335 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 PSG7Q13046 419 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 RIN1Q13671 783 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 CARTPTQ16568 116 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 COLCA1Q6ZS62 124 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 AMIGO2Q86SJ2 522 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 OR2AJ1Q8NGZ0 328 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 DNAJC9Q8WXX5 260 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 LRTOMTQ8WZ04 291 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 YIPF5Q969M3 257 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 PITX2Q99697 317 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 ATF6BQ99941 703 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 CDADC1Q9BWV3 514 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 BPESC1Q9GZL8 116 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 SHARPINQ9H0F6 387 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 TUBG2Q9NRH3 451 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 NKIRAS2Q9NYR9 191 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
VAPA-201ENST00000340541 J3QW42 95 aa13.1□□□□□ -0.31
VAPA-201ENST00000340541 PHF1O43189 567 aaPredicted RBP13.1□□□□□ -0.31
VAPA-201ENST00000340541 LMX1BO60663 402 aa13.1□□□□□ -0.31
VAPA-201ENST00000340541 RP2O75695 350 aa13.1□□□□□ -0.31
VAPA-201ENST00000340541 IGHV1-46P01743 117 aa13.1□□□□□ -0.31
VAPA-201ENST00000340541 ADH4P08319 380 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms