RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IKZF5Q9H5V7 419 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 IGKV1-8A0A0C4DH67 115 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 A0A1W2PS29 197 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 CD300LBA8K4G0 201 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 IFNA17P01571 189 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 HAAOP46952 286 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 WDR88Q6ZMY6 472 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 RIMKLAQ8IXN7 391 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 NUDT15Q9NV35 164 aa11.48□□□□□ -0.57
LIN54-201ENST00000340417 MEIKINA0A087WXM9 373 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 C9orf172C9J069 976 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 NME2P1O60361 137 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 NME2P22392 152 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 ZNF121P58317 390 aaPredicted RBP11.47□□□□□ -0.57
LIN54-201ENST00000340417 TIAL1Q01085 375 aaKnown RBP eCLIP11.47□□□□□ -0.579e-7■■■■□ 23.8
LIN54-201ENST00000340417 Q6ZTK2 550 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 A4GNTQ9UNA3 340 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 ZNF816-ZNF321PA0A0X1KG74 233 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 IMPA2O14732 288 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 RPS27P42677 84 aaKnown RBP11.47□□□□□ -0.57
LIN54-201ENST00000340417 FAM219BQ5XKK7 198 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 OR6F1Q8NGZ6 308 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 SPACA1Q9HBV2 294 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 TRAV6A0A075B6T7 132 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 IFNA5P01569 189 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 C21orf33P30042 268 aaPredicted RBP11.47□□□□□ -0.57
LIN54-201ENST00000340417 HCCSP53701 268 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 GLIPR1L1Q6UWM5 242 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 RNF165Q6ZSG1 346 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 NKAIN3Q8N8D7 197 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 SPSB2Q99619 263 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 NICN1Q9BSH3 213 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 PBOV1Q9GZY1 135 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 CYSLTR2Q9NS75 346 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 ZNF391Q9UJN7 358 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 ZNF736B4DX44 427 aaPredicted RBP11.47□□□□□ -0.57
LIN54-201ENST00000340417 ALPLP05186 524 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 CALCBP10092 127 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 DEFA4P12838 97 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 CCL2P13500 99 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 PCSK6P29122 969 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 DDOSTP39656 456 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 CTU2Q2VPK5 515 aaKnown RBP11.47□□□□□ -0.57
LIN54-201ENST00000340417 LIPNQ5VXI9 398 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 Q8N402 240 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 RHNO1Q9BSD3 238 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 BCO1Q9HAY6 547 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 HAO2Q9NYQ3 351 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 OR14I1A6ND48 311 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 PRF1P14222 555 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 NBL1P41271 181 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 PTH2RP49190 550 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 YIF1BQ5BJH7 314 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 MMP27Q9H306 513 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 EHFQ9NZC4 300 aa11.47□□□□□ -0.57
LIN54-201ENST00000340417 UBBP0CG47 229 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 ERGP11308 486 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 ZNF774Q6NX45 483 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 CNTNAP3BQ96NU0 1288 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 MS4A5Q9H3V2 200 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 MLLT11Q13015 90 aaPredicted RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 FBXW9Q5XUX1 488 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 GABRG1Q8N1C3 465 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 SDHAF2Q9NX18 166 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 EP300Q09472 2414 aaPredicted RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 KANTRA0A1W2PQU2 76 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 RAB3DO95716 219 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 RPS2P15880 293 aaKnown RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 PSMA6P60900 246 aaKnown RBP11.46□□□□□ -0.57
LIN54-201ENST00000340417 STEAP3Q658P3 488 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 FAM214BQ7L5A3 538 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 KLHDC8BQ8IXV7 354 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 ZNF679Q8IYX0 411 aa11.46□□□□□ -0.57
LIN54-201ENST00000340417 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 FITM1A5D6W6 292 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 CT45A8P0DMV1 189 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 CT45A9P0DMV2 189 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 WNT3P56703 355 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 CT45A2Q5DJT8 189 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 SYT9Q86SS6 491 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 MARVELD2Q8N4S9 558 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 WNT2BQ93097 391 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 CMBLQ96DG6 245 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 RGCCQ9H4X1 137 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 SIRT3Q9NTG7 399 aaPredicted RBP11.46□□□□□ -0.58
LIN54-201ENST00000340417 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 PLPP3O14495 311 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 PMS2P2O95744 297 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 FMODQ06828 376 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 SH2D5Q6ZV89 423 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 AKAP14Q86UN6 197 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 ANGPTL5Q86XS5 388 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 CD300AQ9UGN4 299 aa11.46□□□□□ -0.58
LIN54-201ENST00000340417 ARID1BQ8NFD5 2236 aaPredicted RBP11.45□□□□□ -0.58
LIN54-201ENST00000340417 GABRPO00591 440 aa11.45□□□□□ -0.58
LIN54-201ENST00000340417 CTSBP07858 339 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms