RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 OR11H4Q8NGC9 324 aa9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 AQP3Q92482 292 aa9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 GCDHQ92947 438 aaPredicted RBP9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 INTS12Q96CB8 462 aaKnown RBP9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 SEH1LQ96EE3 360 aa9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 TMEM138Q9NPI0 162 aa9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 MRPS18BQ9Y676 258 aaKnown RBP9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 LHFPL6Q9Y693 200 aa9.53□□□□□ -0.88
TRAF3IP2-201ENST00000340026 DNASE1P24855 282 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 BDKRB2P30411 391 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 DSCR4P56555 118 aaPredicted RBP9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 FOXL2P58012 376 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 CHAF1BQ13112 559 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 CSRP2Q16527 193 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 GLYATL3Q5SZD4 288 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 TEX261Q6UWH6 196 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 OR2W3Q7Z3T1 314 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 MDGA2Q7Z553 956 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 OR4K17Q8NGC6 315 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 THAP3Q8WTV1 239 aaPredicted RBP9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 TMEM41AQ96HV5 264 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 PBOV1Q9GZY1 135 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 PNRC2Q9NPJ4 139 aaKnown RBP9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 PIPOXQ9P0Z9 390 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 UPB1Q9UBR1 384 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 FBXL2Q9UKC9 423 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 U3KQ87 197 aa9.52□□□□□ -0.88
TRAF3IP2-201ENST00000340026 A0A1B0GTI1 187 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 OR6C65A6NJZ3 312 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 C9J4A7 227 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TLX3O43711 291 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TBPP20226 339 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 CLRN1P58418 232 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 GRB2P62993 217 aaKnown RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 HIST1H3AP68431 136 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 HIST2H3PS2Q5TEC6 136 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TSSK4Q6SA08 328 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 Q6ZTK2 550 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 HIST2H3AQ71DI3 136 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 NLRC3Q7RTR2 1065 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MAML2Q8IZL2 1156 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SLC22A24Q8N4F4 322 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PLPP7Q8NBV4 271 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TMEM54Q969K7 222 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 OR10A4Q9H209 315 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 GDF2Q9UK05 429 aaPredicted RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SLC5A6Q9Y289 635 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 FLVCR1Q9Y5Y0 555 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TRAV18A0A075B6X5 111 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 LINC00862A6NCI5 91 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 C2orf72A6NCS6 295 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SMLR1H3BR10 107 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 AKR7A2O43488 359 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ACP1P24666 158 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 CLDN6P56747 220 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 STEAP1BQ6NZ63 245 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MTFR2Q6P444 385 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 LRFN4Q6PJG9 635 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PGAP1Q75T13 922 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 OR5D14Q8NGL3 314 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SSC4DQ8WTU2 575 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PPP1R14AQ96A00 147 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 C10orf35Q96D05 121 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SMAD5Q99717 465 aaKnown RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 TMEM165Q9HC07 324 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MGAT4CQ9UBM8 478 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ANAPC10Q9UM13 185 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 FLVCR2Q9UPI3 526 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MRPS18CQ9Y3D5 142 aaKnown RBP9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 HS3ST3B1Q9Y662 390 aa9.52□□□□□ -0.89
TRAF3IP2-201ENST00000340026 METTL21EPA6NDL7 271 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 H3BML4 177 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 RAD52P43351 418 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MLF1P58340 268 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SRSF4Q08170 494 aaKnown RBP9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 MEF2DQ14814 521 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 LGALSLQ3ZCW2 172 aaPredicted RBP9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 GABRG1Q8N1C3 465 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 OR1M1Q8NGA1 313 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PIGKQ92643 395 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SGCZQ96LD1 299 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 GUCD1Q96NT3 240 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 FOXN4Q96NZ1 517 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ATG5Q9H1Y0 275 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PROK2Q9HC23 129 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 SLC23A1Q9UHI7 598 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PLSCR5A0PG75 271 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 KDM4BO94953 1096 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 LIFP15018 202 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ZNF43P17038 809 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ALDH3B1P43353 468 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 GABREP78334 506 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 PMPCAQ10713 525 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ODF4Q2M2E3 257 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 ZNF260Q3ZCT1 412 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
TRAF3IP2-201ENST00000340026 DTWD2Q8NBA8 298 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms