RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 SQSTM1Q13501 440 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ATXN7L3Q14CW9 347 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 JOSD1Q15040 202 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 KCNMB1Q16558 191 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 GDPD4Q6W3E5 623 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 THSD4Q6ZMP0 1018 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 LANCL3Q6ZV70 420 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 OR10H4Q8NGA5 316 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 MITD1Q8WV92 249 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 MRGPRX1Q96LB2 322 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 NOL4LQ96MY1 436 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SLC17A9Q9BYT1 436 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ACTR3CQ9C0K3 210 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 PRSS16Q9NQE7 514 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 DMRT3Q9NQL9 472 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 B4GALT6Q9UBX8 382 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 OR2AT4A6NND4 320 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ARL6IP5O75915 188 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 WNT11O96014 354 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SNRNP70P08621 437 aaKnown RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF883P0CG24 379 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 CD59P13987 128 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 BCKDHBP21953 392 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 IMPA1P29218 277 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SNCAP37840 140 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 GPR3P46089 330 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 NDUFA6P56556 154 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ERVFRD-1P60508 538 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 GABREP78334 506 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 HSF1Q00613 529 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SPEM2Q0P670 501 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 RHEBQ15382 184 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ANKRD16Q6P6B7 361 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 MBOAT2Q6ZWT7 520 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 CDK20Q8IZL9 346 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 OR4E2Q8NGC2 313 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 OR4K17Q8NGC6 315 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF671Q8TAW3 534 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 Q8WTZ3 238 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 RCC1LQ96I51 464 aaKnown RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 HSPA12BQ96MM6 686 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 DDA1Q9BW61 102 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 HDAC8Q9BY41 377 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 Q9N2J8 555 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 CMC2Q9NRP2 79 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 KCNE3Q9Y6H6 103 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 A0A0B4J2A0 478 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM269A0A1B0GVZ9 245 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 WIPF3A6NGB9 483 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 FRS3O43559 492 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 PRICKLE3O43900 615 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SOX15O60248 233 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 KAT7O95251 611 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 AKAIN1P0CW23 69 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 DRD1P21728 446 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF84P51523 738 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SIRPAP78324 504 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 TP53I3Q53FA7 332 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 FBXW9Q5XUX1 488 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ASPHD2Q6ICH7 369 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 C11orf88Q6PI97 169 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 STAC2Q6ZMT1 411 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SLC25A42Q86VD7 318 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 PRSS58Q8IYP2 241 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 MICU1Q9BPX6 476 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 C20orf24Q9BUV8 137 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 CHST11Q9NPF2 352 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 KRCC1Q9NPI7 259 aaPredicted RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 SHPKQ9UHJ6 478 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 ETV7Q9Y603 341 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 V9GY05 133 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 EML6Q6ZMW3 1958 aa5.01□□□□□ -1.61
CSDE1-202ENST00000339438 UTP20O75691 2785 aaKnown RBP5.01□□□□□ -1.61
CSDE1-202ENST00000339438 GXYLT2A0PJZ3 443 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM202A6NGA9 273 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 MASP2O00187 686 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF208O43345 1280 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 NDUFV2P19404 249 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 MAKP20794 623 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SOAT1P35610 550 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 MAP3K8P41279 467 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PPM1FP49593 454 aaPredicted RBP5□□□□□ -1.61
CSDE1-202ENST00000339438 PRKXP51817 358 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 BIKQ13323 160 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 TRA2AQ13595 282 aaKnown RBP eCLIP5□□□□□ -1.61
CSDE1-202ENST00000339438 CRMP1Q14194 572 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF234Q14588 700 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 POMZP3Q6PJE2 187 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 GDF7Q7Z4P5 450 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 NRROSQ86YC3 692 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 NRMQ8IXM6 262 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 GABRG1Q8N1C3 465 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 SYS1Q8N2H4 156 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 ARL14Q8N4G2 192 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 DEFB119Q8N690 84 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 LMNTD1Q8N9Z9 388 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 CADM4Q8NFZ8 388 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 FAM174AQ8TBP5 190 aa5□□□□□ -1.61
CSDE1-202ENST00000339438 PHYHIPQ92561 330 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms