RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 NDUFB5O43674 189 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 FADS1O60427 444 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ICOSLGO75144 302 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 SLC25A12O75746 678 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 STK17BO94768 372 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 RPP14O95059 124 aaKnown RBP9.64□□□□□ -0.87
RTN3-201ENST00000338850 WISP1O95388 367 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 AHSA1O95433 338 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 WNT11O96014 354 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 CD8AP01732 235 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 F13BP05160 661 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 CYC1P08574 325 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L2P0CJ85 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L3P0CJ86 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L4P0CJ87 422 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L5P0CJ88 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L6P0CJ89 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4L7P0CJ90 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 HLA-GP17693 338 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 TBPP20226 339 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 AGTR1P30556 359 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 S100A11P31949 105 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 CCR4P51679 360 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 SLC26A5P58743 744 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 SEC61A1P61619 476 aaKnown RBP9.64□□□□□ -0.87
RTN3-201ENST00000338850 GLO1Q04760 184 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ZNF345Q14585 488 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 NNATQ16517 81 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 PCGF3Q3KNV8 242 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 GXYLT1Q4G148 440 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 HLA-DQA1Q5Y7H0 255 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 TMEM65Q6PI78 240 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 RHOUQ7L0Q8 258 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 SLC29A4Q7RTT9 530 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 PRSS42Q7Z5A4 293 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ADGRE4PQ86SQ3 457 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 LYPD6Q86Y78 171 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 D2HGDHQ8N465 521 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ADPRHL1Q8NDY3 354 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 BEST4Q8NFU0 473 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 OR1N1Q8NGS0 311 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 TSEN15Q8WW01 171 aaKnown RBP9.64□□□□□ -0.87
RTN3-201ENST00000338850 ORAI1Q96D31 301 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 TSSK2Q96PF2 358 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 SEC22CQ9BRL7 303 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 WWTR1Q9GZV5 400 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ELOVL3Q9HB03 270 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 RYDENQ9NUL5 291 aaKnown RBP9.64□□□□□ -0.87
RTN3-201ENST00000338850 MED11Q9P086 117 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 COPS7AQ9UBW8 275 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 DUX4Q9UBX2 424 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 ZNF69Q9UC07 566 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 GLS2Q9UI32 602 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 HHLA2Q9UM44 414 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 PPIEQ9UNP9 301 aaKnown RBP9.64□□□□□ -0.87
RTN3-201ENST00000338850 FLVCR2Q9UPI3 526 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 R4GMQ9 66 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 HECTD1Q9ULT8 2610 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 BOD1L1Q8NFC6 3051 aa9.64□□□□□ -0.87
RTN3-201ENST00000338850 UBR5O95071 2799 aaPredicted RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 TMED7-TICAM2A0A0A6YYA0 188 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SLC22A23A1A5C7 686 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TMEM200CA6NKL6 621 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 FTCDNL1E5RQL4 147 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 F5H5P2 479 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 PLPP3O14495 311 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 ADAM10O14672 748 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TERTO14746 1132 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 NKX2-8O15522 239 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 ZNF208O43345 1280 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 HCRTR2O43614 444 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SUSD5O60279 629 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TSC22D2O75157 780 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 RP2O75695 350 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 CDC123O75794 336 aaPredicted RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 ITGA5P08648 1049 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 UBCP0CG48 685 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 VSIG10L2P0DP72 767 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 NAGAP17050 411 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 CXCL2P19875 107 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 SOX2P48431 317 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 DAP3P51398 398 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 CLDN12P56749 244 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 RPS15P62841 145 aaKnown RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 HSD11B2P80365 405 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 FGL1Q08830 312 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 PLCXD2Q0VAA5 305 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 MEF2DQ14814 521 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 ACKR1Q16570 336 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 MEP1BQ16820 701 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 CLVS2Q5SYC1 327 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TMEM244Q5VVB8 128 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 C1orf140Q5VVS0 124 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 TMEM225Q6GV28 225 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 FAHD2BQ6P2I3 314 aaPredicted RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 HSD17B13Q7Z5P4 300 aaPredicted RBP9.63□□□□□ -0.87
RTN3-201ENST00000338850 C9orf40Q8IXQ3 194 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 PM20D2Q8IYS1 436 aa9.63□□□□□ -0.87
RTN3-201ENST00000338850 OR6K3Q8NGY3 331 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms