RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RP2O75695 350 aa13□□□□□ -0.33
PRKN-201ENST00000338468 ATP5HO75947 161 aa13□□□□□ -0.33
PRKN-201ENST00000338468 GYPBP06028 91 aa13□□□□□ -0.33
PRKN-201ENST00000338468 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
PRKN-201ENST00000338468 CLUP10909 449 aa13□□□□□ -0.33
PRKN-201ENST00000338468 GCH1P30793 250 aa13□□□□□ -0.33
PRKN-201ENST00000338468 SLC25A1P53007 311 aa13□□□□□ -0.33
PRKN-201ENST00000338468 PSG7Q13046 419 aa13□□□□□ -0.33
PRKN-201ENST00000338468 UNQ6126/PRO20091Q6UXV3 157 aa13□□□□□ -0.33
PRKN-201ENST00000338468 RDH5Q92781 318 aa13□□□□□ -0.33
PRKN-201ENST00000338468 MAP6Q96JE9 813 aa13□□□□□ -0.33
PRKN-201ENST00000338468 COQ7Q99807 217 aa13□□□□□ -0.33
PRKN-201ENST00000338468 HCAR1Q9BXC0 346 aa13□□□□□ -0.33
PRKN-201ENST00000338468 HDHD2Q9H0R4 259 aa13□□□□□ -0.33
PRKN-201ENST00000338468 NKIRAS2Q9NYR9 191 aa13□□□□□ -0.33
PRKN-201ENST00000338468 LRP5LA4QPB2 252 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 TVP23AA6NH52 213 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 TIPRLO75663 272 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 TACSTD2P09758 323 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ZNF23P17027 643 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 SPI1P17947 270 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 RPS27P42677 84 aaKnown RBP12.99□□□□□ -0.33
PRKN-201ENST00000338468 RASSF2P50749 326 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ZNF81P51508 661 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ARHGDIAP52565 204 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 CCL8P80075 99 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 MRPS11P82912 194 aaKnown RBP12.99□□□□□ -0.33
PRKN-201ENST00000338468 CCNIQ14094 377 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 TRIP10Q15642 601 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 SPRNQ5BIV9 151 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 C6orf52Q5T4I8 152 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ACSM5Q6NUN0 579 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 TMEM154Q6P9G4 183 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ARL9Q6T311 187 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 ZNF540Q8NDQ6 660 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 PROKR2Q8NFJ6 384 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 OR10S1Q8NGN2 331 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 OR2T4Q8NH00 348 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 SNX33Q8WV41 574 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 DCLRE1CQ96SD1 692 aaKnown RBP12.99□□□□□ -0.33
PRKN-201ENST00000338468 SOX7Q9BT81 388 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 YY1AP1Q9H869 796 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 WDR76Q9H967 626 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 CMC2Q9NRP2 79 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 GPR160Q9UJ42 338 aa12.99□□□□□ -0.33
PRKN-201ENST00000338468 CUBNO60494 3623 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 SVEP1Q4LDE5 3571 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 TLX2O43763 284 aaPredicted RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 E2F6O75461 281 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 IGHV1-46P01743 117 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 ACHEP22303 614 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 IL2RGP31785 369 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 GRK5P34947 590 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 MOGQ16653 247 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 TSTQ16762 297 aaKnown RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 PCK2Q16822 640 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 PCGF3Q3KNV8 242 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 SHQ1Q6PI26 577 aaKnown RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 COLCA1Q6ZS62 124 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 ZNF511Q8NB15 262 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 TEX47Q8TBZ9 253 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 CMBLQ96DG6 245 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 MMADHCQ9H3L0 296 aaPredicted RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 MED20Q9H944 212 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 CHODLQ9H9P2 273 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 YAE1D1Q9NRH1 226 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 ZNF275Q9NSD4 429 aaPredicted RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 KCNG2Q9UJ96 466 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 PURGQ9UJV8 347 aaKnown RBP12.98□□□□□ -0.33
PRKN-201ENST00000338468 COMMD3-BMI1R4GMX3 469 aa12.98□□□□□ -0.33
PRKN-201ENST00000338468 FAM183AA6NL82 134 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 H3BN98 237 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 WNT9BO14905 357 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 SPRY3O43610 288 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 ADH4P08319 380 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 ACSM4P0C7M7 580 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 OSMP13725 252 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 KITLGP21583 273 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 TUBG1P23258 451 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 ANOS1P23352 680 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 CDK5Q00535 292 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 GINS1Q14691 196 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 Q6ZR03 302 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 ASRGL1Q7L266 308 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 NAA40Q86UY6 237 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 HIPK1Q86Z02 1210 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 HAVCR1Q96D42 359 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 MSI2Q96DH6 328 aaKnown RBP12.97□□□□□ -0.33
PRKN-201ENST00000338468 DUS3LQ96G46 650 aaKnown RBP12.97□□□□□ -0.33
PRKN-201ENST00000338468 PITX2Q99697 317 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 CDADC1Q9BWV3 514 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 MSL2Q9HCI7 577 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 CACNG2Q9Y698 323 aa12.97□□□□□ -0.33
PRKN-201ENST00000338468 MALRD1Q5VYJ5 2156 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 RIIAD1A6NNX1 92 aa12.96□□□□□ -0.33
PRKN-201ENST00000338468 A8MV72 311 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms