RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ZNF283Q8N7M2 679 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 FGFBP3Q8TAT2 258 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SLC25A18Q9H1K4 315 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 PRORYQ9H606 182 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 NIPAL2Q9H841 368 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 G6PC2Q9NQR9 355 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 MALT1Q9UDY8 824 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 ARHGAP21Q5T5U3 1957 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 TLN1Q9Y490 2541 aaKnown RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 TMEM8BA6NDV4 472 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 ACOD1A6NK06 481 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 ZNF879B4DU55 563 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 F5H5K5 113 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SGCEO43556 437 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 GATBO75879 557 aaKnown RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 OCM2P0CE71 109 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 PTGER4P35408 488 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SOX2P48431 317 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 PCBD1P61457 104 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SCRN3Q0VDG4 424 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 NRN1LQ496H8 165 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 C1orf185Q5T7R7 199 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 BCL2L15Q5TBC7 163 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 VWA1Q6PCB0 445 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 GFRALQ6UXV0 394 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 TFAP2EQ6VUC0 442 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SEM1Q6ZVN7 128 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 OR51A4Q8NGJ6 313 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 OR10AC1Q8NH08 325 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 SLX1AQ9BQ83 275 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 RNF121Q9H920 327 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 FAM206AQ9NX38 181 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 CCDC59Q9P031 241 aaKnown RBP12.88□□□□□ -0.35
CBX3-201ENST00000337620 FAM215AQ9Y5M1 114 aa12.88□□□□□ -0.35
CBX3-201ENST00000337620 DOCK7Q96N67 2140 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 MBD3L4A6NDZ8 208 aaPredicted RBP12.87□□□□□ -0.35
CBX3-201ENST00000337620 MBD3L3A6NE82 208 aaPredicted RBP12.87□□□□□ -0.35
CBX3-201ENST00000337620 MBD3L5A6NJ08 208 aaPredicted RBP12.87□□□□□ -0.35
CBX3-201ENST00000337620 SLC2A1P11166 492 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 PAX7P23759 505 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 MYL9P24844 172 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 MPGP29372 298 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 HOXD11P31277 338 aaPredicted RBP12.87□□□□□ -0.35
CBX3-201ENST00000337620 CX3CR1P49238 355 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 RORCP51449 518 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 CAV3P56539 151 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 ZNF404Q494X3 552 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 Q499Y3 187 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 RPRMLQ8N4K4 120 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 AKR7LQ8NHP1 331 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 MBD3L2Q8NHZ7 208 aaPredicted RBP12.87□□□□□ -0.35
CBX3-201ENST00000337620 GPR148Q8TDV2 347 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 SLC7A6Q92536 515 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 MED18Q9BUE0 208 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 PBOV1Q9GZY1 135 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 NOX4Q9NPH5 578 aa12.87□□□□□ -0.35
CBX3-201ENST00000337620 ARL6IP5O75915 188 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 PEX19P40855 299 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 ZNF121P58317 390 aaPredicted RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 PSMA6P60900 246 aaKnown RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 PSG4Q00888 419 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 KLRB1Q12918 225 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 HNRNPA0Q13151 305 aaKnown RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 RAB35Q15286 201 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 UNQ9370/PRO34162Q6UXP9 181 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 SYT9Q86SS6 491 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 KDF1Q8NAX2 398 aaPredicted RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 OR6K3Q8NGY3 331 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 TBC1D15Q8TC07 691 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 TSEN15Q8WW01 171 aaKnown RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 ORAI1Q96D31 301 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 KCNS3Q9BQ31 491 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 OR2H1Q9GZK4 316 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 SLC24A3Q9HC58 644 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 PRRG2O14669 202 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 NCR1O76036 304 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 TOXO94900 526 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 IL18BPO95998 194 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 IL2RAP01589 272 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 ANXA2P07355 339 aaKnown RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 ITGA5P08648 1049 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 UCHL1P09936 223 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 SLC6A9P48067 706 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 MTNR1BP49286 362 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 SLC36A2Q495M3 483 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 HSD17B12Q53GQ0 312 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 ZNF704Q6ZNC4 412 aaPredicted RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 ZNF627Q7L945 461 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 LUZP2Q86TE4 346 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 NAA40Q86UY6 237 aa12.86□□□□□ -0.35
CBX3-201ENST00000337620 C6orf62Q9GZU0 229 aaPredicted RBP12.86□□□□□ -0.35
CBX3-201ENST00000337620 HDHD2Q9H0R4 259 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms