RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 C10orf111Q8N326 155 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OR5H2Q8NGV7 314 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 COQ8AQ8NI60 647 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 FAM3DQ96BQ1 224 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 DEFB127Q9H1M4 99 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 TUBG2Q9NRH3 451 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PLEKHJ1Q9NW61 149 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PIP5K1CO60331 668 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OPRL1P41146 370 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 AGFG1P52594 562 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZMYND11Q15326 602 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 HES5Q5TA89 166 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 INO80EQ8NBZ0 244 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 DNAAF1Q8NEP3 725 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 RNF128Q8TEB7 428 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 HAS2Q92819 552 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF226Q9NYT6 803 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 NLKQ9UBE8 527 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 DUSP13Q9UII6 198 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 IFITM5A6NNB3 132 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SLC17A2O00624 439 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 FFAR1O14842 300 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PRKNO60260 465 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 RAB2AP61019 212 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PSMF1Q92530 271 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 RNF32Q9H0A6 362 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 IL17BQ9UHF5 180 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SLC5A6Q9Y289 635 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SMIM30A4D0T7 59 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PLATP00750 562 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 CTLA4P16410 223 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 IL2RGP31785 369 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 TAS2R46P59540 309 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 KCNJ8Q15842 424 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 METTL11BQ5VVY1 283 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 FAM198BQ6UWH4 519 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 NCCRP1Q6ZVX7 275 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 GPR155Q7Z3F1 870 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OR6V1Q8N148 313 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OR5T2Q8NGG2 359 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 PIGCQ92535 297 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ANAPC16Q96DE5 110 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 KCNJ15Q99712 375 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 NUDT15Q9NV35 164 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 LRRC30A6NM36 301 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF850A8MQ14 1090 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 AIPO00170 330 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 TNFRSF1AP19438 455 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MEOX1P50221 254 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SRPXP78539 464 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZP4Q12836 540 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 SWI5Q1ZZU3 235 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 RNASE12Q5GAN4 147 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF770Q6IQ21 691 aaPredicted RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 TRILQ7L0X0 811 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MDGA2Q7Z553 956 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 NOXO1Q8NFA2 376 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 OR4Q3Q8NH05 313 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MOGAT1Q96PD6 335 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 CLEC2DQ9UHP7 191 aa6.16□□□□□ -1.42
SF3B1-201ENST00000335508 MRPS28Q9Y2Q9 187 aaKnown RBP6.16□□□□□ -1.42
SF3B1-201ENST00000335508 RALGAPA2Q2PPJ7 1873 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 TRAV1-2A0A0B4J238 106 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 A0A1W2PQ09 198 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 FAM25EA8MYX2 175 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 J3QW42 95 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 GLSO94925 669 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 SERPINE2P07093 398 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 CCL3P10147 92 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 CD1EP15812 388 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 SHC1P29353 583 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 GABRA4P48169 554 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF133P52736 654 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 LTBQ06643 244 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 PCOLCEQ15113 449 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 BEND4Q6ZU67 534 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF573Q86YE8 665 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 OR2M3Q8NG83 312 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 BARHL1Q9BZE3 327 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF700Q9H0M5 742 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 PPA2Q9H2U2 334 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF286AQ9HBT8 521 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 PLA2G3Q9NZ20 509 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 GDF2Q9UK05 429 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 C5orf51A6NDU8 294 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 NOS1APO75052 506 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 GCM2O75603 506 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ACTL6BO94805 426 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 TBX6O95947 436 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 FCER2P06734 321 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 CD96P40200 585 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 MGAT2Q10469 447 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ZNF169Q14929 603 aaPredicted RBP6.15□□□□□ -1.42
SF3B1-201ENST00000335508 CDNFQ49AH0 187 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 ELFN2Q5R3F8 820 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 GLYATL3Q5SZD4 288 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 FHL5Q5TD97 284 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 OR8D4Q8NGM9 314 aa6.15□□□□□ -1.42
SF3B1-201ENST00000335508 RAB3CQ96E17 227 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms