RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SRSF10O75494 262 aaKnown RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 DXOO77932 396 aaKnown RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 OPN1LWP04000 364 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 NAGAP17050 411 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 PGCP20142 388 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CFPP27918 469 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CD34P28906 385 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CAPZA1P52907 286 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CXADRP78310 365 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 MPPED2Q15777 294 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 PTCRAQ6ISU1 281 aaPredicted RBP11.01□□□□□ -0.65
VPS33B-201ENST00000333371 TFAP2EQ6VUC0 442 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 FJX1Q86VR8 437 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CHST4Q8NCG5 386 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CASTOR1Q8WTX7 329 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 FGGYQ96C11 551 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 ZDHHC12Q96GR4 267 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 EMC6Q9BV81 110 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 WWTR1Q9GZV5 400 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CST11Q9H112 138 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 PCED1AQ9H1Q7 454 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 CNTD2Q9H8S5 307 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 OR52A1Q9UKL2 312 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 HHLA2Q9UM44 414 aa11.01□□□□□ -0.65
VPS33B-201ENST00000333371 NCOA6Q14686 2063 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 TMEM269A0A1B0GVZ9 245 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 LMO7DNF2Z398 122 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 ZNF354AO60765 605 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 AQP8O94778 261 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 TPPPO94811 219 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 PLATP00750 562 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 ICAM2P13598 275 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 CSNK1EP49674 416 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 ARL4DP49703 201 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 GLO1Q04760 184 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 PPP1R1AQ13522 171 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 C14orf28Q4W4Y0 310 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 PAPD4Q6PIY7 484 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 PXT1Q8NFP0 134 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 OR52N4Q8NGI2 321 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 OR5M8Q8NGP6 311 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 CCDC107Q8WV48 283 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 PPP1R1CQ8WVI7 109 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 HLA-CQ95604 372 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 ZC3H10Q96K80 434 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 NUDT22Q9BRQ3 303 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 PELOQ9BRX2 385 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 SLC5A6Q9Y289 635 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 R4GMQ9 66 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 EML6Q6ZMW3 1958 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 TMEM265A0A087WTH1 108 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 LDLRAD4O15165 306 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 EIF4E2O60573 245 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 ANOS1P23352 680 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 GNALP38405 381 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 POLR2HP52434 150 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 AKR1C2P52895 323 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 NXPH1P58417 271 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 AKR1C1Q04828 323 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 OR7A5Q15622 319 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 JMJD6Q6NYC1 403 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 TRAPPC6BQ86SZ2 158 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 PAQR4Q8N4S7 273 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 ADAD2Q8NCV1 583 aaKnown RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 VRK1Q99986 396 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 ZNF471Q9BX82 626 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 ALX4Q9H161 411 aaPredicted RBP11□□□□□ -0.65
VPS33B-201ENST00000333371 SLC17A5Q9NRA2 495 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 UPB1Q9UBR1 384 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 MKL2Q9ULH7 1088 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 VDAC3Q9Y277 283 aa11□□□□□ -0.65
VPS33B-201ENST00000333371 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 A8MVM7 634 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 MS4A18H0YCH9 400 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 BET1O15155 118 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 DCNP07585 359 aaKnown RBP10.99□□□□□ -0.65
VPS33B-201ENST00000333371 GNB3P16520 340 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 CTRB1P17538 263 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 GALNSP34059 522 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 OR1D5P58170 312 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 DEFA5Q01523 94 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 UNC119Q13432 240 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 MS4A18Q3C1V0 323 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 CTRB2Q6GPI1 263 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 KCTD9Q7L273 389 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-201ENST00000333371 ZNF584Q8IVC4 421 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 SLC26A10Q8NG04 563 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 OR2I1PQ8NGU4 316 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 OR1L3Q8NH93 324 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 ST7LQ8TDW4 575 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 ZBTB8AQ96BR9 441 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 SOX7Q9BT81 388 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 GDF2Q9UK05 429 aaPredicted RBP10.99□□□□□ -0.65
VPS33B-201ENST00000333371 RHBDD3Q9Y3P4 386 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 HRH3Q9Y5N1 445 aa10.99□□□□□ -0.65
VPS33B-201ENST00000333371 A0A1B0GTI1 187 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms