RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 ACTL6BO94805 426 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 MFGE8Q08431 387 aaPredicted RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 MRM1Q6IN84 353 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 ZAR1Q86SH2 424 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 NUDCD2Q8WVJ2 157 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 EMG1Q92979 244 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 SRRQ9GZT4 340 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 DYNLRB1Q9NP97 96 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 NINQ8N4C6 2090 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF254O75437 659 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 PTHLHP12272 177 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 POU3F3P20264 500 aaPredicted RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 PTBP1P26599 531 aaKnown RBP eCLIP11.74□□□□□ -0.537e-7■■■■■ 29.5
VSTM4-202ENST00000332853 RPL19P84098 196 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 ZADH2Q8N4Q0 377 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 LILRB4Q8NHJ6 448 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 REEP6Q96HR9 211 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 HRASLSQ9HDD0 168 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 LRP12Q9Y561 859 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 LCTP09848 1927 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 MED6O75586 246 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 PPP3CBP16298 524 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 DDOSTP39656 456 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 RPL23AP62750 156 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 TRILQ7L0X0 811 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 VASH2Q86V25 355 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 SUMF1Q8NBK3 374 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 MOGAT1Q96PD6 335 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 RBM38Q9H0Z9 239 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 KLK11Q9UBX7 282 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 K7EPK0 472 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 SDCBPO00560 298 aaPredicted RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 IFNA1P01562 189 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 FOXL2P58012 376 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 SLC10A1Q14973 349 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 FAM71E2Q8N5Q1 922 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 TMEM52Q8NDY8 209 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 C11orf40Q8WZ69 217 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 ALKBH3Q96Q83 286 aaPredicted RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 TSPAN32Q96QS1 320 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 CDX2Q99626 313 aaPredicted RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 ADGRL4Q9HBW9 690 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 TMEM9BQ9NQ34 198 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 FKBP2P26885 142 aaKnown RBP11.74□□□□□ -0.53
VSTM4-202ENST00000332853 GUCA2AQ02747 115 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 LINC00299Q6ZSB3 139 aa11.74□□□□□ -0.53
VSTM4-202ENST00000332853 CEBPZOSA8MTT3 80 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 VAMP5O95183 116 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 UBBP0CG47 229 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 PRKACAP17612 351 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 DCTDP32321 178 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 CDKN2AP42771 156 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 ZFP36L2P47974 494 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 GZMMP51124 257 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 RPS27AP62979 156 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 UBA52P62987 128 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 DEFB109BQ30KR1 87 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 WIPI1Q5MNZ9 446 aaPredicted RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 DDOQ99489 341 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 PLEKHB1Q9UF11 243 aaPredicted RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 ASCC3Q8N3C0 2202 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 EFSO43281 561 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 MC2RQ01718 297 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 MZT1Q08AG7 82 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 SFRP5Q5T4F7 317 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 OR51F2Q8NH61 342 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 AKR7LQ8NHP1 331 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 RNF128Q8TEB7 428 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 MED18Q9BUE0 208 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 CACNA1CQ13936 2221 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 E9PI62 339 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 NOXO1Q8NFA2 376 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 PCM1Q15154 2024 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 IFNA17P01571 189 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 ALOX5APP20292 161 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 R4GN57 208 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 LIMS3P0CW19 117 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 LIMS4P0CW20 117 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 CD79BP40259 229 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 RBP2P50120 134 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 ARF1P84077 181 aaKnown RBP11.73□□□□□ -0.53
VSTM4-202ENST00000332853 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 ANKRD16Q6P6B7 361 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 DHRS13Q6UX07 377 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 OR1J2Q8NGS2 313 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 NECAP2Q9NVZ3 263 aa11.73□□□□□ -0.53
VSTM4-202ENST00000332853 IGKV1-8A0A0C4DH67 115 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 PMS2P2O95744 297 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 CD3DP04234 171 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 FAM157BP0CG42 384 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 MAMSTRQ6ZN01 415 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 OTOSQ8NHW6 89 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 TTC9Q92623 222 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 SLCO5A1Q9H2Y9 848 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 OCIAD1Q9NX40 245 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 PTTG3PQ9NZH4 202 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 PIGBOS1A0A0B4J2F0 54 aa11.72□□□□□ -0.53
VSTM4-202ENST00000332853 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms