RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 PJVKQ0ZLH3 352 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 ZNF776Q68DI1 518 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 TANGO2Q6ICL3 276 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 DMBX1Q8NFW5 382 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 OR4D6Q8NGJ1 314 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 RELTQ969Z4 430 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 ZNF304Q9HCX3 659 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 KIF26BQ2KJY2 2108 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 WIPF3A6NGB9 483 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 LDLRAD4O15165 306 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 EFSO43281 561 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 SGCEO43556 437 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 ARRB1P49407 418 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 RIDAP52758 137 aaKnown RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 BTG2P78543 158 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 AKIRIN2Q53H80 203 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 PARGQ86W56 976 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 ZSCAN4Q8NAM6 433 aaPredicted RBP12.96□□□□□ -0.33
SNX20-202ENST00000330943 ASB17Q8WXJ9 295 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 ROBO4Q8WZ75 1007 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 FAM46BQ96A09 425 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 DGAT2Q96PD7 388 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 NRIP2Q9BQI9 281 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 OR10A5Q9H207 317 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 OR2S2Q9NQN1 319 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
SNX20-202ENST00000330943 CNTRLQ7Z7A1 2325 aa12.96□□□□□ -0.34
SNX20-202ENST00000330943 A0A0A6YYH2 397 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 A6NJ64 397 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 NUDT19A8MXV4 375 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 PLRG1O43660 514 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 LMX1BO60663 402 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 SLC16A7O60669 478 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 DUS4LO95620 317 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 MUC1P15941 1255 aaPredicted RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 SKP2Q13309 424 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 RBM39Q14498 530 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 MED25Q71SY5 747 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 SLC16A13Q7RTY0 426 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 ACKR4Q9NPB9 350 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 DHCR7Q9UBM7 475 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 ZNF806P0C7X5 589 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 FAM157CP0CG43 387 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 CBR1P16152 277 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 GPR3P46089 330 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 BIKQ13323 160 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 CCINQ13939 588 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 PEA15Q15121 130 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MST1LQ2TV78 715 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 ZNF585AQ6P3V2 769 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 IL34Q6ZMJ4 242 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 CATSPERDQ86XM0 798 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 METTL21AQ8WXB1 218 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 AQP3Q92482 292 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 CCNL2Q96S94 520 aaPredicted RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 RNF126Q9BV68 326 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 RHOFQ9HBH0 211 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 RCC2Q9P258 522 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 GDF2Q9UK05 429 aaPredicted RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 EMC9Q9Y3B6 208 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 COL4A2P08572 1712 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 METTL21EPA6NDL7 271 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MSGN1A6NI15 193 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 K7EQS6 105 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 IFNA6P05013 189 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 HEXAP06865 529 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 FSTP19883 344 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MAOAP21397 527 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 NAAAQ02083 359 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 RUNX3Q13761 415 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 SMAD2Q15796 467 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 IGSF11Q5DX21 431 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 C1orf53Q5VUE5 145 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 C1QL3Q5VWW1 255 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 KCTD18Q6PI47 426 aaPredicted RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 SFTPA2Q8IWL1 248 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MARCH1Q8TCQ1 289 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 ABHD6Q9BV23 337 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 FN3KRPQ9HA64 309 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 WBP1LQ9NX94 342 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 LPAR3Q9UBY5 353 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 PCOLCE2Q9UKZ9 415 aa12.95□□□□□ -0.34
SNX20-202ENST00000330943 MRPS33Q9Y291 106 aaKnown RBP12.95□□□□□ -0.34
SNX20-202ENST00000330943 A0A0J9YY10 115 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 LOC107986453A0A1B0GWG9 222 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 H0YIZ8 118 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 RAB5BP61020 215 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 PHF19Q5T6S3 580 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 TMEM200AQ86VY9 491 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 FAM219AQ8IW50 185 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 BHLHE23Q8NDY6 225 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 SLC25A36Q96CQ1 311 aa12.94□□□□□ -0.34
SNX20-202ENST00000330943 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
SNX20-202ENST00000330943 FAM60AQ9NP50 221 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms