RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 FABP6P51161 128 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 ADGRF3Q8IZF5 1079 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 LINC01555Q8NAE3 123 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OR52N1Q8NH53 320 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OR56B4Q8NH76 319 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 CPNE4Q96A23 557 aaPredicted RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 EID2BQ96D98 161 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OR2M2Q96R28 347 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 TRDV1A0A1B0GX56 115 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 NKX6-3A6NJ46 265 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 SCO1O75880 301 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 TCRBP04435 133 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 DEFA4P12838 97 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 PSMB1P20618 241 aaKnown RBP9.24□□□□□ -0.93
CHD3-201ENST00000330494 KITLGP21583 273 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 MSMO1Q15800 293 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 TMEM81Q6P7N7 255 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 SARGQ9BW04 601 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 CNTNAP3Q9BZ76 1288 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 OPA3Q9H6K4 179 aa9.24□□□□□ -0.93
CHD3-201ENST00000330494 A0A1W2PS29 197 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 MBTPS2O43462 519 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 FZD2Q14332 565 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 OR8G2PQ6IF36 304 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 OR10K2Q6IF99 312 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 RAB39BQ96DA2 213 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 SEMG1P04279 462 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 LAP3P28838 519 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 OPRM1P35372 400 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 CD300LGQ6UXG3 332 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ARIH2OSQ8N7S6 290 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 OR10G3Q8NGC4 313 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 BORCS7Q96B45 105 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ALKBH3Q96Q83 286 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 MED18Q9BUE0 208 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 PTDSS2Q9BVG9 487 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 CMC2Q9NRP2 79 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 KLF13Q9Y2Y9 288 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 TAF1LQ8IZX4 1826 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 MBP02144 154 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 CPT2P23786 658 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ABCD3P28288 659 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 UBE2MP61081 183 aaKnown RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 FCN2Q15485 313 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 SLC35B4Q969S0 331 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 KTI12Q96EK9 354 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 NECAP2Q9NVZ3 263 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 NPAP1Q9NZP6 1156 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ZAR1LA6NP61 321 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ZNF732B4DXR9 585 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 GLULP15104 373 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 POU3F3P20264 500 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 LGALS4P56470 323 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 RPL11P62913 178 aaKnown RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 THEM4Q5T1C6 240 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 FAM27D1Q5T7N8 215 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 RBMXL3Q8N7X1 1067 aaKnown RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 OR52I2Q8NH67 350 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 OR1L3Q8NH93 324 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 NANPQ8TBE9 248 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 RDH5Q92781 318 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 THSD7AQ9UPZ6 1657 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 TRAV20A0A0B4J274 112 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 PRSS37A4D1T9 235 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 K7EQS6 105 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 M0R135 149 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 IL2RAP01589 272 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 APOA2P02652 100 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 CPEP16870 476 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 MNX1P50219 401 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 CATR1Q13166 79 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 HTR4Q13639 388 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 C11orf40Q8WZ69 217 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ZNF799Q96GE5 643 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 PATZ1Q9HBE1 687 aaKnown RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 B3GAT1Q9P2W7 334 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 MYOTQ9UBF9 498 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 COL4A5P29400 1685 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 FRG2CA6NGY1 282 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 A8MXE2 369 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 PI3P19957 117 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 FABP5Q01469 135 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 ACSM1Q08AH1 577 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 RFPL4BQ6ZWI9 263 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 CXorf67Q86X51 503 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 PXT1Q8NFP0 134 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 SLC25A43Q8WUT9 341 aaPredicted RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 ERVMER34-1Q9H9K5 563 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 MRPL22Q9NWU5 206 aaKnown RBP9.23□□□□□ -0.93
CHD3-201ENST00000330494 SLCO1C1Q9NYB5 712 aa9.23□□□□□ -0.93
CHD3-201ENST00000330494 TRABD2BA6NFA1 517 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 RNF212BA8MTL3 300 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 GPX5O75715 221 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ALX3O95076 343 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 SPINK2P20155 84 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 TESK1Q15569 626 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 KHDC1LQ5JSQ8 128 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 HACD4Q5VWC8 232 aa9.22□□□□□ -0.93
CHD3-201ENST00000330494 ZNF439Q8NDP4 499 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms