RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 PMPCAQ10713 525 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 LMAN2Q12907 356 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 CCINQ13939 588 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 HIKESHIQ53FT3 197 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 MED25Q71SY5 747 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 HMGN2P46Q86SG4 172 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 CDC20BQ86Y33 519 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 ZNF280BQ86YH2 543 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 CARFQ8N187 725 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 LILRA3Q8N6C8 439 aaPredicted RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 CCDC54Q8NEL0 328 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 OR51A7Q8NH64 312 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 TGIF2Q9GZN2 237 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 RAB33BQ9H082 229 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SLC26A1Q9H2B4 701 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 SUSD2Q9UGT4 822 aa7.55□□□□□ -1.2
SKA2-201ENST00000330137 MRM2Q9UI43 246 aaKnown RBP7.55□□□□□ -1.2
SKA2-201ENST00000330137 A0A1W2PPE2 198 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 FIGNL2A6NMB9 653 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 TOX3O15405 576 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 FUT1P19526 365 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 HIST1H1TP22492 207 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 MSX1P28360 303 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 IL2RGP31785 369 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MC3RP41968 323 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 AKR1C3P42330 323 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 RGS19P49795 217 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ELOBQ15370 118 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 AKIRIN2Q53H80 203 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 DCAF10Q5QP82 559 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 Q6ZVL8 140 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 KCTD9Q7L273 389 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF765Q7L2R6 523 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 GPR137CQ8N3F9 429 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF676Q8N7Q3 588 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 POC1AQ8NBT0 407 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR2A12Q8NGT7 310 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR4K13Q8NH42 304 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MRGPRFQ96AM1 343 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ANKRD9Q96BM1 317 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 NTNG2Q96CW9 530 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 LMLNQ96KR4 655 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 Q96M85 177 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 PACRGQ96M98 296 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 SMAD5Q99717 465 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 HIPK2Q9H2X6 1198 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 CKLFQ9UBR5 152 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SLC25A13Q9UJS0 675 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 KLK13Q9UKR3 277 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 AMDHD2Q9Y303 409 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 C13orf42A0A1B0GVH6 325 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MSGN1A6NI15 193 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF354AO60765 605 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 ERAL1O75616 437 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 ARG1P05089 322 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SFTPBP07988 381 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 CSF2RAP15509 400 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 EMC4Q5J8M3 183 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SOHLH1Q5JUK2 328 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 VAX1Q5SQQ9 334 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 C1orf100Q5SVJ3 147 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MRPL2Q5T653 305 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 LHX8Q68G74 356 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 RPL7L1Q6DKI1 246 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 CDPF1Q6NVV7 123 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 AMZ2Q86W34 360 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 NKAIN3Q8N8D7 197 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR52E1Q8NGJ3 308 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 WDR92Q96MX6 357 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 GINS3Q9BRX5 216 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ALG12Q9BV10 488 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 EIF5A2Q9GZV4 153 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 USP36Q9P275 1121 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 RAB22AQ9UL26 194 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ANAPC10Q9UM13 185 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 TMED7Q9Y3B3 224 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 FBXO7Q9Y3I1 522 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 IER3IP1Q9Y5U9 82 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 V9GYS6 101 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 COL4A6Q14031 1691 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 BORCS7-ASMTA0A0B4J1R7 106 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 A0A1W2PR48 441 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MEIS3P1A6NDR6 274 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 TLCD2A6NGC4 264 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 M0R143 59 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 PMP2P02689 132 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SOD2P04179 222 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SOD3P08294 240 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 OR8G3PP0DMU2 310 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 IRF1P10914 325 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 IGFBP3P17936 291 aaPredicted RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 AKT2P31751 481 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 SMAD3P84022 425 aaKnown RBP7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF674Q2M3X9 581 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 ZNF260Q3ZCT1 412 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 MIDNQ504T8 468 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 PRRT3Q5FWE3 981 aa7.54□□□□□ -1.2
SKA2-201ENST00000330137 COA6Q5JTJ3 125 aaKnown RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms